Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 SNORD116-17-201ENST00000383929 92 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 SNORD116-15-201ENST00000384445 92 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 SNORA67.4-201ENST00000384688 142 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 SNORD116-19-201ENST00000384729 92 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 MIR196B-201ENST00000384852 84 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RNA5SP201-201ENST00000410316 124 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC027124.2-201ENST00000428249 105 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 TOMM22P2-201ENST00000430735 237 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AL603825.1-201ENST00000438481 80 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC004386.2-201ENST00000441858 148 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RNA5SP310-201ENST00000459084 116 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RNU6-1211P-201ENST00000459179 105 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 snoU13.15-201ENST00000459407 104 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC114982.1-201ENST00000469402 321 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RPL23AP70-201ENST00000483361 460 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RNA5SP24-201ENST00000516478 95 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 RNU6-919P-201ENST00000516731 104 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 MIR5688-201ENST00000580619 83 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 HMGN2P15-201ENST00000585707 270 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 AC008873.1-201ENST00000625051 138 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
SHISA4Q96DD7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.35□□□□□ -1.87
SHISA4Q96DD7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.34□□□□□ -1.87
SHISA4Q96DD7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.218-201ENST00000364218 104 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 RNU4-10P-201ENST00000364383 140 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 SNORD87-201ENST00000364849 89 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 MIR616-201ENST00000385293 97 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AL035461.1-201ENST00000421490 332 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AL135790.2-201ENST00000437701 267 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 RPL23AP58-201ENST00000440453 469 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AP004217.1-201ENST00000480579 346 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 Y_RNA.676-201ENST00000516393 96 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 RNU6-1007P-201ENST00000516586 107 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AC025281.1-201ENST00000567026 265 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 MIR5006-201ENST00000583027 110 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 RPS15AP11-201ENST00000594193 385 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 TUG1_4.1-201ENST00000619464 181 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 AC064859.1-201ENST00000624741 174 ntBASIC3.34□□□□□ -1.87
SHISA4Q96DD7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SHISA4Q96DD7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SHISA4Q96DD7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SHISA4Q96DD7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHISA4Q96DD7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHISA4Q96DD7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 AC010733.2-201ENST00000589496 5702 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 SNORD114-19-201ENST00000363072 75 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 MIR526A2-201ENST00000390198 65 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 SNORD37.2-201ENST00000391075 66 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 RNU6-855P-201ENST00000410395 104 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 AL714022.1-201ENST00000439897 151 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 RPS3P1-201ENST00000456781 192 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 snoU13.14-201ENST00000459372 104 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 RNU1-117P-201ENST00000517041 158 ntBASIC3.33□□□□□ -1.88
SHISA4Q96DD7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SHISA4Q96DD7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AL133475.1-201ENST00000404414 305 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AC006461.1-201ENST00000412637 326 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AL121914.1-201ENST00000450188 156 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 SNORA70.12-201ENST00000516084 153 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AC112693.2-201ENST00000556538 232 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AL391903.3-201ENST00000612158 163 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 MIR3658-201ENST00000636291 56 ntBASIC3.32□□□□□ -1.88
SHISA4Q96DD7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms