Protein–RNA interactions for Protein: Q96CB9

NSUN4, 5-methylcytosine rRNA methyltransferase NSUN4, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4Q96CB9 MIR190B-201ENST00000401119 79 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.9□□□□□ -2.11
NSUN4Q96CB9 NDUFB4P10-201ENST00000452541 359 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AC093303.1-201ENST00000514549 295 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AC090617.3-201ENST00000573670 475 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AC016727.1-205ENST00000605437 569 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 AL355073.2-201ENST00000612106 557 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.9□□□□□ -2.11
NSUN4Q96CB9 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 TPTEP1-208ENST00000636884 213 ntBASIC1.9□□□□□ -2.11
NSUN4Q96CB9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 MTND5P16-201ENST00000460269 1703 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 RNU1-42P-201ENST00000364033 160 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 SNORA75.4-201ENST00000391278 119 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 RNU1-139P-201ENST00000391307 165 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 FTH1P12-201ENST00000432137 551 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 UBE2V1P7-201ENST00000446395 340 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 RNU6-221P-201ENST00000459541 99 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 MTND4P17-201ENST00000470444 350 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AC025465.3-201ENST00000510570 311 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AL117351.2-201ENST00000513571 157 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 Y_RNA.683-201ENST00000516508 93 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 Y_RNA.691-201ENST00000516611 103 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 RNU6-107P-201ENST00000516643 102 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 RNA5SP481-201ENST00000516814 122 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AC084364.2-201ENST00000546924 395 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AC005730.3-201ENST00000583067 366 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AC005014.2-201ENST00000607795 599 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
NSUN4Q96CB9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 RNU6-222P-201ENST00000362438 107 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 SNORA72.1-201ENST00000363485 129 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 Y_RNA.303-201ENST00000364998 94 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 RNU6-417P-201ENST00000384712 107 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MIR548B-201ENST00000385247 97 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AL117342.1-201ENST00000404861 406 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MIR1323-201ENST00000408090 73 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 RNA5SP504-201ENST00000410676 117 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC025647.1-201ENST00000517879 253 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC093023.1-201ENST00000547375 507 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MIR5701-3-201ENST00000578890 82 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MIR5701-1-201ENST00000585138 82 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 snoU13.31-201ENST00000607291 104 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MIR5701-2-201ENST00000615634 82 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MTND5P35-201ENST00000557537 1720 ntBASIC1.88□□□□□ -2.11
NSUN4Q96CB9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 Y_RNA.364-201ENST00000365532 101 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 RNU6-296P-201ENST00000384608 107 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 RNU6-331P-201ENST00000384724 107 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 AC092423.1-201ENST00000430165 186 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 CYCSP23-201ENST00000519781 313 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 MZT1P2-201ENST00000604387 248 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 AC092794.2-201ENST00000620933 563 ntBASIC1.87□□□□□ -2.11
NSUN4Q96CB9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NSUN4Q96CB9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 MIR1185-2-201ENST00000408687 86 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 MIR1267-201ENST00000408723 78 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 RNU4-14P-201ENST00000410858 122 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC245047.4-201ENST00000433189 144 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 SCARNA16.2-201ENST00000516520 172 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 RNU6-264P-201ENST00000517134 104 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC105029.1-201ENST00000520250 669 ntBASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.86□□□□□ -2.11
NSUN4Q96CB9 AC004584.2-201ENST00000570407 410 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms