Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Z83843.1-201ENST00000604070 3685 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 MIR367-201ENST00000362299 68 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 Y_RNA.337-201ENST00000365312 102 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 MIR15B-201ENST00000385045 98 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 MIR300-201ENST00000401138 83 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 RPL30P13-201ENST00000418873 348 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 COTL1P1-201ENST00000422309 375 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 AC006386.2-201ENST00000624491 75 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 AC012005.1-201ENST00000624575 75 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
VTI1AQ96AJ9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 SNORA27.1-201ENST00000362604 124 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-234P-201ENST00000365229 104 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-407P-201ENST00000365280 104 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-643P-201ENST00000384018 107 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-376P-201ENST00000384731 106 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 MIR513C-201ENST00000401352 84 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 SNORA36B-201ENST00000410438 131 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AL357552.1-201ENST00000445254 415 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC016717.1-201ENST00000448918 286 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 HSPE1P13-201ENST00000451143 297 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 SNORD65B-201ENST00000459126 73 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RPL23AP94-201ENST00000512518 302 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 RNU6-971P-201ENST00000516920 106 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC109329.2-201ENST00000519658 482 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC026333.2-201ENST00000542164 106 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 LARP7P3-201ENST00000579888 337 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 MIR4513-201ENST00000581077 86 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 MIR4325-201ENST00000583049 90 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 MIR4753-201ENST00000585119 83 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 snoZ196.1-201ENST00000625269 89 ntBASIC3.85□□□□□ -1.79
VTI1AQ96AJ9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 FAM35CP-201ENST00000554755 2470 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 ZNF702P-202ENST00000434269 1966 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 RNU6-486P-201ENST00000363116 107 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 Y_RNA.261-201ENST00000364631 102 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 RNU6-975P-201ENST00000384296 105 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 MIR518C-201ENST00000384822 101 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 AC074290.1-201ENST00000448883 135 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 RNU6-221P-201ENST00000459541 99 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 RPS26P55-201ENST00000471178 356 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 AC083906.5-201ENST00000503722 328 ntBASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VTI1AQ96AJ9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 Y_RNA.81-201ENST00000362997 102 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 RNU6-57P-201ENST00000411348 103 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 RNU7-197P-201ENST00000458836 62 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 RNA5SP341-201ENST00000516261 117 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 AC027419.1-201ENST00000522976 328 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 AC112693.2-201ENST00000556538 232 ntBASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTI1AQ96AJ9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AL159152.1-201ENST00000635019 2587 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AL356292.1-201ENST00000283110 373 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 Y_RNA.420-201ENST00000384043 110 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 RPL23AP58-201ENST00000440453 469 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AC008267.6-201ENST00000441664 139 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AC010598.1-201ENST00000510378 103 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AP003357.1-201ENST00000604497 148 ntBASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VTI1AQ96AJ9 AC009487.2-201ENST00000420969 6821 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 RNU6-199P-201ENST00000362954 107 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 Y_RNA.542-201ENST00000384641 111 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 MIR1278-201ENST00000408753 81 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 RPL23AP67-201ENST00000465341 474 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 AC114982.1-201ENST00000469402 321 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 UBE2DNL-203ENST00000474922 222 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 RNU6-63P-201ENST00000516690 95 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 AC127455.1-201ENST00000565496 145 ntBASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms