Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.326-201ENST00000365176 113 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 RPEP5-201ENST00000441137 268 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AC011406.1-201ENST00000512440 370 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 RNU6-1146P-201ENST00000516282 102 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AC005786.1-201ENST00000588553 154 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AC005176.2-201ENST00000596933 147 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.812-201ENST00000610788 101 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.784-201ENST00000613803 101 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.787-201ENST00000616522 101 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.780-201ENST00000617336 101 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.801-201ENST00000619005 101 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 CTSLP2-204ENST00000629029 392 ntBASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40AQ8WXH6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.422-201ENST00000384054 114 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 RNU6-20P-201ENST00000384106 107 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.455-201ENST00000384230 98 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 AL079342.1-201ENST00000401460 267 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 AL590004.1-201ENST00000405321 300 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 AP002001.1-203ENST00000534002 267 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40AQ8WXH6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 RNU6-626P-201ENST00000363354 107 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 Y_RNA.380-201ENST00000365663 111 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 RNA5SP508-201ENST00000411327 119 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AC016909.1-201ENST00000415916 166 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 YWHAEP4-201ENST00000505390 198 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 RNA5SP320-201ENST00000516263 124 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AC006504.6-201ENST00000590142 199 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AL353149.1-201ENST00000610667 244 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AC004467.1-201ENST00000615678 330 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 AC091932.3-201ENST00000624223 323 ntBASIC2.08□□□□□ -2.08
RAB40AQ8WXH6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 Y_RNA.230-201ENST00000364348 109 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 MIR1252-201ENST00000408861 65 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 HMGN2P34-201ENST00000437647 269 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 MTND2P29-201ENST00000438595 412 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 MIR3684-201ENST00000579779 74 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
RAB40AQ8WXH6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC005002.2-201ENST00000438228 269 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 RNU6-397P-201ENST00000516226 104 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 RNU6-764P-201ENST00000516396 105 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC113195.1-201ENST00000579952 141 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC006380.1-201ENST00000603598 186 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 PART1_1.1-201ENST00000611761 217 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
RAB40AQ8WXH6 MIR338-201ENST00000636369 67 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms