Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC091812.1-201ENST00000432235 1948 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.422-201ENST00000384054 114 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 RNU6-975P-201ENST00000384296 105 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.485-201ENST00000384395 102 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.645-201ENST00000391229 102 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 RN7SKP192-201ENST00000411291 327 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MTCO1P44-201ENST00000441935 243 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AL357134.1-201ENST00000445848 426 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 UQCRBP2-201ENST00000447827 297 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC074290.1-201ENST00000448883 135 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 PCNPP5-201ENST00000452246 481 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC067942.3-201ENST00000512025 362 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.721-201ENST00000517207 102 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.812-201ENST00000610788 101 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.784-201ENST00000613803 101 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.787-201ENST00000616522 101 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AC010205.1-201ENST00000616668 449 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.780-201ENST00000617336 101 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 Y_RNA.801-201ENST00000619005 101 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 AL078596.1-201ENST00000624856 447 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 U6.92-201ENST00000636464 89 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 ZNF72P-201ENST00000425869 1908 ntBASIC2.03□□□□□ -2.08
SLC44A1Q8WWI5 MIR340-201ENST00000362125 95 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 MIR410-201ENST00000362222 80 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-727P-201ENST00000363592 107 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 SNORA63.7-201ENST00000365579 123 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 SNORD14.1-201ENST00000365609 90 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 SNORA40.19-201ENST00000390846 128 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AL121890.1-201ENST00000435457 205 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AC010531.2-201ENST00000465012 153 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 SNORA40.9-201ENST00000515895 93 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 RNU1-117P-201ENST00000517041 158 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AC040926.1-201ENST00000530195 238 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AK6P2-201ENST00000549020 471 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AL031274.2-201ENST00000599419 203 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 RPS29P30-201ENST00000600975 111 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 AL121655.1-201ENST00000605811 308 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
SLC44A1Q8WWI5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU4-50P-201ENST00000364361 141 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SNORD87-201ENST00000364849 89 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1264P-201ENST00000383891 107 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-639P-201ENST00000384074 107 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-708P-201ENST00000384217 107 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 ELOCP21-201ENST00000412558 336 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU1-131P-201ENST00000458943 161 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-498P-201ENST00000459468 107 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 RPL26P26-201ENST00000480251 434 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AC010469.2-201ENST00000496412 480 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AC022432.1-201ENST00000595739 310 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AL390123.1-201ENST00000603216 237 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AC104695.3-201ENST00000604052 296 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AC025754.2-201ENST00000606491 432 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SDR42E1P4-201ENST00000620894 481 ntBASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLC44A1Q8WWI5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SLC44A1Q8WWI5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2□□□□□ -2.09
SLC44A1Q8WWI5 LINC02555-201ENST00000563933 1951 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 Y_RNA.424-201ENST00000384063 103 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-160P-201ENST00000384591 107 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-823P-201ENST00000391042 103 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2□□□□□ -2.09
SLC44A1Q8WWI5 AL590004.1-201ENST00000405321 300 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 TOMM22P2-201ENST00000430735 237 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-948P-201ENST00000516374 107 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 RNU6-856P-201ENST00000516959 98 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 AC018448.1-201ENST00000552843 316 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 MIR4680-201ENST00000580906 66 ntBASIC2□□□□□ -2.09
SLC44A1Q8WWI5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms