Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 Z75741.1-201ENST00000446793 314 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RPL23AP7-203ENST00000449021 469 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RPL23AP54-201ENST00000495129 419 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AP004371.1-201ENST00000525240 214 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 MIR3136-201ENST00000583498 78 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 MIR3651-201ENST00000630427 90 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.93□□□□□ -1.78
NEDD1Q8NHV4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 U3.8-201ENST00000363675 217 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 RNU6-787P-201ENST00000384032 107 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AL355796.1-201ENST00000406706 323 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AC244098.2-201ENST00000422068 99 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AL590383.1-201ENST00000428602 75 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AC107297.1-201ENST00000459991 176 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 COX6CP6-201ENST00000490840 228 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 MIR5006-201ENST00000583027 110 ntBASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD1Q8NHV4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 SNORD114-7-201ENST00000362520 77 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 RNU6-487P-201ENST00000365430 104 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 RNU2-70P-201ENST00000410718 179 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 AL139281.1-201ENST00000422120 335 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 HMGN2P30-201ENST00000423237 256 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 AF228730.3-201ENST00000436691 102 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 MIR5009-201ENST00000578736 100 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 U7.8-201ENST00000619968 63 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 MIR3202-2-201ENST00000635980 79 ntBASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD1Q8NHV4 AC017071.1-201ENST00000564407 2204 ntBASIC3.9□□□□□ -1.78
NEDD1Q8NHV4 AL589743.1-201ENST00000551932 2712 ntBASIC3.9□□□□□ -1.78
NEDD1Q8NHV4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD1Q8NHV4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.78
NEDD1Q8NHV4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 Y_RNA.17-201ENST00000362433 111 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 SNORA18.2-201ENST00000383865 132 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 RNA5SP127-201ENST00000411051 133 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 snoU13.24-201ENST00000458998 104 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 RPL23AP67-201ENST00000465341 474 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 RPS27AP10-201ENST00000496103 208 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 SNORD77.4-201ENST00000516158 81 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 RNU6-904P-201ENST00000516206 101 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 SNORA18.4-201ENST00000516440 124 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 AC007751.1-201ENST00000529260 376 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 AL034555.1-201ENST00000604816 211 ntBASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.9□□□□□ -1.79
NEDD1Q8NHV4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AC007256.1-201ENST00000392253 2765 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 Y_RNA.78-201ENST00000362970 110 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 RNU6-884P-201ENST00000363889 107 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 Y_RNA.362-201ENST00000365518 110 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 Y_RNA.366-201ENST00000365540 102 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 RNU6-1296P-201ENST00000383879 107 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 CYCSP48-201ENST00000417124 323 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AL365496.1-201ENST00000426885 215 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AL121890.1-201ENST00000435457 205 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 RPL37P4-201ENST00000448908 268 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 RNU6-893P-201ENST00000458841 100 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 RPS29P2-201ENST00000479278 136 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 PHBP14-201ENST00000512887 367 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 SNORA31.8-201ENST00000516327 108 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 MIR5680-201ENST00000577577 84 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AC005972.2-201ENST00000604690 348 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 MIR2052-201ENST00000636055 55 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AC000403.1-201ENST00000613696 3585 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 PWAR6-201ENST00000552334 4618 ntBASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD1Q8NHV4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD1Q8NHV4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD1Q8NHV4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD1Q8NHV4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD1Q8NHV4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms