Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SNORD23.1-201ENST00000408212 104 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.92□□□□□ -2.1
CPSF7Q8N684 BX510359.4-201ENST00000423750 193 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
CPSF7Q8N684 MTCO1P44-201ENST00000441935 243 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 AL137792.2-201ENST00000443484 235 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 AC016717.1-201ENST00000448918 286 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.92□□□□□ -2.1
CPSF7Q8N684 AC006157.1-201ENST00000611750 366 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 AL590240.4-201ENST00000616908 390 ntBASIC1.92□□□□□ -2.1
CPSF7Q8N684 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.92□□□□□ -2.1
CPSF7Q8N684 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CPSF7Q8N684 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 AL356292.1-201ENST00000283110 373 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 Y_RNA.39-201ENST00000362620 98 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU6-23P-201ENST00000363283 107 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU1-115P-201ENST00000365329 160 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU6-1145P-201ENST00000384246 107 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU6-975P-201ENST00000384296 105 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 MTCO2P12-201ENST00000427426 682 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 CHEK2P4-201ENST00000450340 246 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU7-57P-201ENST00000459540 60 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 RNU6-948P-201ENST00000516374 107 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 CYCSP23-201ENST00000519781 313 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 AP005660.1-201ENST00000522972 293 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 AC006600.1-201ENST00000572529 153 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 VN1R91P-201ENST00000594377 169 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF7Q8N684 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 MIR4272-201ENST00000635924 64 ntBASIC1.91□□□□□ -2.1
CPSF7Q8N684 U3.8-201ENST00000363675 217 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNA5SP493-201ENST00000364115 91 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNY1P14-201ENST00000384426 108 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 MIR548B-201ENST00000385247 97 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU6-308P-201ENST00000390957 107 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU11-3P-201ENST00000391111 133 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF7Q8N684 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 UQCRBP2-201ENST00000447827 297 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU1-131P-201ENST00000458943 161 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AC067942.3-201ENST00000512025 362 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU6-911P-201ENST00000516523 104 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU2-34P-201ENST00000516534 121 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU6-107P-201ENST00000516643 102 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 RNU4-77P-201ENST00000516692 156 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.11
CPSF7Q8N684 AK6P2-201ENST00000549020 471 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AL442163.3-201ENST00000554110 156 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF7Q8N684 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
CPSF7Q8N684 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF7Q8N684 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.89□□□□□ -2.11
CPSF7Q8N684 Y_RNA.138-201ENST00000363462 102 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 RNU6-474P-201ENST00000384243 107 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 RNU6-1235P-201ENST00000384559 107 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 SNORD12B-201ENST00000410433 91 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 PCNPP5-201ENST00000452246 481 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF7Q8N684 RNU6-498P-201ENST00000459468 107 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 Y_RNA.631-201ENST00000459607 101 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 Y_RNA.701-201ENST00000516812 110 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF7Q8N684 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 AL357075.2-201ENST00000614906 189 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 AC007485.1-201ENST00000616755 206 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 AL138825.1-201ENST00000618587 192 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 AL606534.2-204ENST00000635008 178 ntBASIC1.89□□□□□ -2.11
CPSF7Q8N684 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF7Q8N684 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.89□□□□□ -2.11
CPSF7Q8N684 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CPSF7Q8N684 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CPSF7Q8N684 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF7Q8N684 AL159152.1-201ENST00000635019 2587 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CPSF7Q8N684 Y_RNA.31-201ENST00000362574 102 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 Y_RNA.128-201ENST00000363391 112 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 RNY3P4-201ENST00000384428 101 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 MIR597-201ENST00000384968 97 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 RNA5SP465-201ENST00000391195 109 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF7Q8N684 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 RNU6-57P-201ENST00000411348 103 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 MTCO3P19-201ENST00000415864 321 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 NDUFB4P10-201ENST00000452541 359 ntBASIC1.88□□□□□ -2.11
CPSF7Q8N684 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms