Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
PHTF2Q8N3S3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RNU6-647P-201ENST00000364243 107 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 AL161788.1-201ENST00000441805 169 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RPS4XP11-201ENST00000446897 772 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 CYCSP35-201ENST00000451978 304 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RN7SL293P-201ENST00000481765 281 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 AC110768.1-201ENST00000509222 400 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RN7SKP18-201ENST00000516005 275 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RNU6-772P-201ENST00000516042 105 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RNA5SP208-201ENST00000516156 78 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 AL161756.2-201ENST00000604597 246 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 U3.45-201ENST00000607547 219 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 RMST_8.1-201ENST00000610287 165 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 MIR7515-201ENST00000637837 67 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PHTF2Q8N3S3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.114-201ENST00000363265 113 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 RNU1-101P-201ENST00000391171 127 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 AL603914.1-201ENST00000401964 204 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 AC016909.1-201ENST00000415916 166 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 AC245102.2-201ENST00000448956 180 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.690-201ENST00000516603 95 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 MIR3117-201ENST00000584034 78 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 AC090115.4-201ENST00000609970 188 ntBASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
PHTF2Q8N3S3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 SNORA63.4-201ENST00000362763 126 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 RNU1-72P-201ENST00000362976 153 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 SNORA22-201ENST00000383907 134 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 SNORA9-201ENST00000384215 133 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MIR520G-201ENST00000385064 90 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 RHEBP3-201ENST00000411920 351 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MLLT10P1-201ENST00000418346 262 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MTATP6P21-201ENST00000440681 189 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 SEM1P1-201ENST00000506694 209 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 RNU6-365P-201ENST00000517113 106 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MIR3199-1-201ENST00000582434 88 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 AC097639.2-201ENST00000603159 172 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 AL137849.1-201ENST00000604767 169 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MIR7975-201ENST00000619350 68 ntBASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PHTF2Q8N3S3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 RNU6-743P-201ENST00000364151 106 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 MIR34B-201ENST00000385076 84 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 MIR23A-201ENST00000385245 73 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 FO393413.1-201ENST00000402892 195 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 AC123900.1-201ENST00000420390 96 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 SNORD11-201ENST00000459124 84 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 RNU7-170P-201ENST00000459303 61 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 RNU7-149P-201ENST00000516739 59 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 NDUFA5P6-201ENST00000542110 379 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 AL670379.3-201ENST00000605040 251 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHTF2Q8N3S3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 SNORD9-201ENST00000362566 104 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 Y_RNA.91-201ENST00000363042 107 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 RPS15AP28-201ENST00000435088 386 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 MTCO1P44-201ENST00000441935 243 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 SNORA70.14-201ENST00000516205 110 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PHTF2Q8N3S3 GABRG2-229ENST00000641017 3628 ntBASIC3.77□□□□□ -1.81
PHTF2Q8N3S3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHTF2Q8N3S3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms