Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC022868.1-201ENST00000517767 391 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC006157.1-201ENST00000611750 366 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC040896.1-201ENST00000613819 479 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 AC087588.2-201ENST00000617667 426 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
HERC6Q8IVU3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.202-201ENST00000364083 110 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 RNU6-975P-201ENST00000384296 105 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 RNU2-2P-201ENST00000410396 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.3□□□□□ -2.04
HERC6Q8IVU3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 RNU4-77P-201ENST00000516692 156 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.3□□□□□ -2.04
HERC6Q8IVU3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.3□□□□□ -2.04
HERC6Q8IVU3 AC092447.9-201ENST00000603395 144 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.15-201ENST00000611544 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.16-201ENST00000613119 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.12-201ENST00000613778 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.20-201ENST00000613956 192 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.9-201ENST00000615427 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.11-201ENST00000616345 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.2-201ENST00000616535 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.3-201ENST00000617785 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.19-201ENST00000618602 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 RNU2-1-201ENST00000618664 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.6-201ENST00000619225 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.5-201ENST00000619465 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 U2.10-201ENST00000620268 191 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 AC008873.1-201ENST00000625051 138 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 MTND4P1-201ENST00000457501 1466 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 MTND5P35-201ENST00000557537 1720 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 ZNF355P-201ENST00000427301 3216 ntBASIC2.3□□□□□ -2.04
HERC6Q8IVU3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HERC6Q8IVU3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
HERC6Q8IVU3 U3.8-201ENST00000363675 217 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 RNA5SP493-201ENST00000364115 91 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 MIR583-201ENST00000384846 75 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AC096644.2-201ENST00000429278 159 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 RNU6-498P-201ENST00000459468 107 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 RNU7-57P-201ENST00000459540 60 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AC091179.3-201ENST00000474761 144 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 HMGN2P9-201ENST00000476875 229 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AP005660.1-201ENST00000522972 293 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AC023442.1-201ENST00000531247 422 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AC016925.2-201ENST00000605108 242 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 SNORD58B-201ENST00000607313 66 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
HERC6Q8IVU3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
HERC6Q8IVU3 RNU6-727P-201ENST00000363592 107 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 RNU6-418P-201ENST00000384035 107 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.645-201ENST00000391229 102 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.28□□□□□ -2.04
HERC6Q8IVU3 MTCO1P44-201ENST00000441935 243 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 AC083806.3-201ENST00000614016 455 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.28□□□□□ -2.04
HERC6Q8IVU3 AL138825.1-201ENST00000618587 192 ntBASIC2.28□□□□□ -2.04
HERC6Q8IVU3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HERC6Q8IVU3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HERC6Q8IVU3 AL159152.1-201ENST00000635019 2587 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 AC091812.1-201ENST00000432235 1948 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 MIRLET7G-201ENST00000362280 84 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 SNORA63C-201ENST00000364578 129 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RNU1-115P-201ENST00000365329 160 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 SNORA48.3-201ENST00000391081 134 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.27□□□□□ -2.05
HERC6Q8IVU3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.27□□□□□ -2.05
HERC6Q8IVU3 U8.22-201ENST00000459141 133 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RNU7-169P-201ENST00000459456 61 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 AC010531.2-201ENST00000465012 153 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RNU6-911P-201ENST00000516523 104 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RN7SKP49-201ENST00000516675 260 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 SUMO2P18-201ENST00000518873 252 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 RNU6-988P-201ENST00000519081 107 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 MZT1P2-201ENST00000604387 248 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 AL590240.4-201ENST00000616908 390 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 MIR7111-201ENST00000619751 72 ntBASIC2.27□□□□□ -2.05
HERC6Q8IVU3 SNORD114-6-201ENST00000364393 72 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 RNU4-42P-201ENST00000364738 142 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 MIR606-201ENST00000384851 96 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 AC008134.1-201ENST00000420943 193 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 AC108667.1-201ENST00000428618 249 ntBASIC2.26□□□□□ -2.05
HERC6Q8IVU3 MTND2P29-201ENST00000438595 412 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms