Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VRK3Q8IV63 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VRK3Q8IV63 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
VRK3Q8IV63 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VRK3Q8IV63 SNORD114-19-201ENST00000363072 75 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 U3.9-201ENST00000363823 204 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RNU6-324P-201ENST00000363957 106 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 Y_RNA.287-201ENST00000364853 94 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 SNORA72.4-201ENST00000384174 132 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 AL133475.1-201ENST00000404414 305 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RNU6-710P-201ENST00000410424 105 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 TOMM22P2-201ENST00000430735 237 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RPS3P1-201ENST00000456781 192 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.74□□□□□ -1.97
VRK3Q8IV63 MIR5688-201ENST00000580619 83 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VRK3Q8IV63 AC010332.2-201ENST00000613083 1904 ntBASIC2.74□□□□□ -1.97
VRK3Q8IV63 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VRK3Q8IV63 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VRK3Q8IV63 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 RNU6-899P-201ENST00000363947 107 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 RNA5SP205-201ENST00000364653 136 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 SNORD87-201ENST00000364849 89 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 RNU6-376P-201ENST00000384731 106 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC027124.2-201ENST00000428249 105 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC010099.1-201ENST00000455434 375 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 SCARNA8-201ENST00000515924 131 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 RNA5SP272-201ENST00000516095 111 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 RNU6-107P-201ENST00000516643 102 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC022616.8-201ENST00000533569 253 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC027176.1-201ENST00000560204 514 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 MIR4474-201ENST00000579189 78 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC006111.3-201ENST00000622137 383 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC010889.1-201ENST00000566193 2666 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 AC100821.1-201ENST00000523153 2479 ntBASIC2.73□□□□□ -1.97
VRK3Q8IV63 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VRK3Q8IV63 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VRK3Q8IV63 U3.8-201ENST00000363675 217 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 RNU6-1048P-201ENST00000364054 107 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 Y_RNA.310-201ENST00000365063 113 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 Y_RNA.456-201ENST00000384232 111 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 SNORA8.3-201ENST00000384679 139 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 NDUFB4P4-201ENST00000404822 243 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 AC104332.2-201ENST00000429959 156 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 AC107083.1-201ENST00000439643 279 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 AC008267.6-201ENST00000441664 139 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 EIF4BP1-201ENST00000554881 351 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 AL391813.1-201ENST00000603098 260 ntBASIC2.72□□□□□ -1.97
VRK3Q8IV63 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VRK3Q8IV63 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
VRK3Q8IV63 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VRK3Q8IV63 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
VRK3Q8IV63 SNORA18.2-201ENST00000383865 132 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 MIR616-201ENST00000385293 97 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 SNORA40-201ENST00000388090 126 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 MIR526A2-201ENST00000390198 65 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 RNU6-750P-201ENST00000390946 107 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 MTND4LP9-201ENST00000427694 174 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC025750.2-201ENST00000442609 450 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC145146.1-201ENST00000496370 254 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC107027.2-201ENST00000512197 115 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 RNU2-44P-201ENST00000516795 194 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 DNAJC19P2-201ENST00000593340 302 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 AC008873.1-201ENST00000625051 138 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 U6.115-201ENST00000636045 103 ntBASIC2.71□□□□□ -1.98
VRK3Q8IV63 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.71□□□□□ -1.98
VRK3Q8IV63 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VRK3Q8IV63 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.71□□□□□ -1.98
VRK3Q8IV63 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VRK3Q8IV63 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VRK3Q8IV63 RNU6-1210P-201ENST00000363775 107 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 RNU4-10P-201ENST00000364383 140 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 MIR634-201ENST00000385208 97 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 RNU2-49P-201ENST00000410666 184 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AC087499.2-201ENST00000432861 149 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AC074290.1-201ENST00000448883 135 ntBASIC2.7□□□□□ -1.98
VRK3Q8IV63 AL441985.1-201ENST00000457727 251 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms