Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
NPAS4Q8IUM7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.71-201ENST00000362892 104 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RNU1-23P-201ENST00000363361 144 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 snoU2_19.4-201ENST00000364329 80 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 SNORA26.5-201ENST00000391215 123 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 EBAG9P1-201ENST00000418955 543 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 AC092427.1-202ENST00000430569 476 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 HMGN2P18-201ENST00000450680 270 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RNU6-498P-201ENST00000459468 107 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 AC091826.1-201ENST00000514065 313 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RNU6-1333P-201ENST00000516162 93 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 SNORA70.19-201ENST00000516717 90 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RN7SKP282-201ENST00000516824 299 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 RNU6-1234P-201ENST00000516877 103 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 MIR4431-201ENST00000579990 94 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 MIR1248-201ENST00000629190 106 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 U6.115-201ENST00000636045 103 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 AC018555.1-201ENST00000567548 1980 ntBASIC3.59□□□□□ -1.83
NPAS4Q8IUM7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.59□□□□□ -1.84
NPAS4Q8IUM7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
NPAS4Q8IUM7 AC134026.1-201ENST00000623249 2239 ntBASIC3.59□□□□□ -1.84
NPAS4Q8IUM7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 RNU6-271P-201ENST00000363858 105 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 RNU6-743P-201ENST00000364151 106 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 RNU6-57P-201ENST00000411348 103 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 AL035461.1-201ENST00000421490 332 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 RNU6-221P-201ENST00000459541 99 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 LARP7P3-201ENST00000579888 337 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 MIR4744-201ENST00000581563 82 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 AL359881.1-201ENST00000602916 267 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 U4atac.1-201ENST00000618345 95 ntBASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NPAS4Q8IUM7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 AP006437.1-201ENST00000641440 3685 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.127-201ENST00000363386 109 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.273-201ENST00000364703 102 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 RNU6-578P-201ENST00000390980 103 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 RNU6-1211P-201ENST00000459179 105 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 RN7SL863P-201ENST00000462370 296 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 SNORA4.4-201ENST00000515921 135 ntBASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.57□□□□□ -1.84
NPAS4Q8IUM7 SNORD114-7-201ENST00000362520 77 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 SNORD56.5-201ENST00000364281 72 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 MIR513C-201ENST00000401352 84 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AL139095.1-201ENST00000404326 391 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RPL30P13-201ENST00000418873 348 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 COTL1P1-201ENST00000422309 375 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AC010154.1-201ENST00000425857 269 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RN7SKP164-201ENST00000516138 266 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AC136628.3-201ENST00000521868 290 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AC013791.1-201ENST00000616619 62 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 MIR6852-201ENST00000621699 66 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AC006386.2-201ENST00000624491 75 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AC012005.1-201ENST00000624575 75 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
NPAS4Q8IUM7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 RNA5SP125-201ENST00000364843 120 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AC009238.1-201ENST00000442165 424 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 UBBP3-201ENST00000445497 241 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AC009237.6-201ENST00000446969 424 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 RNU6-453P-201ENST00000516819 85 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms