Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 U3.8-201ENST00000363675 217 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 Y_RNA.383-201ENST00000383855 97 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 MIR586-201ENST00000385035 97 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 MIR181B1-201ENST00000385240 110 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 RNU2-54P-201ENST00000410299 190 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.54□□□□□ -1.84
USP48Q86UV5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.54□□□□□ -1.84
USP48Q86UV5 CYP2C59P-201ENST00000457790 269 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 AC090515.1-201ENST00000465295 476 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 CKS1BP2-201ENST00000497342 240 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.54□□□□□ -1.84
USP48Q86UV5 RNU6-155P-201ENST00000516347 100 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 SNORA27.4-201ENST00000516650 95 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 Z83818.1-201ENST00000603584 150 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 AC006380.1-201ENST00000603598 186 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
USP48Q86UV5 FAM35CP-201ENST00000554755 2470 ntBASIC3.54□□□□□ -1.84
USP48Q86UV5 RNU6-234P-201ENST00000365229 104 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 RNU6-851P-201ENST00000384565 107 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 RNU6-918P-201ENST00000391219 106 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 RNU6-1199P-201ENST00000411249 104 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 SNORD2.1-201ENST00000458762 69 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 RNU7-14P-201ENST00000459331 62 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 AC008413.1-201ENST00000511864 177 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 MIR449C-201ENST00000516047 92 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 RNY3P16-201ENST00000516338 101 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 AC107016.2-201ENST00000547968 190 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.53□□□□□ -1.84
USP48Q86UV5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
USP48Q86UV5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP48Q86UV5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP48Q86UV5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP48Q86UV5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP48Q86UV5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 RNA5SP240-201ENST00000365355 128 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 RNU6-1289P-201ENST00000384431 106 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 MIR300-201ENST00000401138 83 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 MTCO2P33-201ENST00000402100 465 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 RNA5SP274-201ENST00000410484 108 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 RNU2-61P-201ENST00000411069 191 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 AC009963.1-201ENST00000417265 157 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.52□□□□□ -1.85
USP48Q86UV5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.52□□□□□ -1.85
USP48Q86UV5 AL161788.1-201ENST00000441805 169 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 RN7SL633P-201ENST00000488974 297 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.52□□□□□ -1.85
USP48Q86UV5 AC007318.2-201ENST00000620999 243 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 MIR7843-201ENST00000622274 79 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 AC021753.1-201ENST00000635724 168 ntBASIC3.52□□□□□ -1.85
USP48Q86UV5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
USP48Q86UV5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP48Q86UV5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP48Q86UV5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP48Q86UV5 MIR887-201ENST00000401258 79 ntBASIC3.51□□□□□ -1.85
USP48Q86UV5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.51□□□□□ -1.85
USP48Q86UV5 RPS29P6-201ENST00000438196 145 ntBASIC3.51□□□□□ -1.85
USP48Q86UV5 SRIP1-201ENST00000489235 288 ntBASIC3.51□□□□□ -1.85
USP48Q86UV5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
USP48Q86UV5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.51□□□□□ -1.85
USP48Q86UV5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP48Q86UV5 MIR3616-201ENST00000584070 92 ntBASIC3.51□□□□□ -1.85
USP48Q86UV5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP48Q86UV5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.51□□□□□ -1.85
USP48Q86UV5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
USP48Q86UV5 AC073325.2-201ENST00000339545 159 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 Y_RNA.217-201ENST00000364214 105 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 SNORA70B-201ENST00000384210 135 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 Y_RNA.590-201ENST00000410140 107 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 AC074290.1-201ENST00000448883 135 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 Y_RNA.641-201ENST00000459414 105 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 Y_RNA.703-201ENST00000516846 111 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 RNU2-12P-201ENST00000517216 168 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 AC109329.2-201ENST00000519658 482 ntBASIC3.5□□□□□ -1.85
USP48Q86UV5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.5□□□□□ -1.85
USP48Q86UV5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP48Q86UV5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.5□□□□□ -1.85
USP48Q86UV5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP48Q86UV5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.49□□□□□ -1.85
USP48Q86UV5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP48Q86UV5 Y_RNA.170-201ENST00000363746 110 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 MIR95-201ENST00000385072 81 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 MIR1283-1-201ENST00000408494 87 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 RNU2-63P-201ENST00000410792 194 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 AL513477.1-202ENST00000417061 214 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 AC114982.1-201ENST00000469402 321 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 HMGN2P9-201ENST00000476875 229 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.49□□□□□ -1.85
USP48Q86UV5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.49□□□□□ -1.85
USP48Q86UV5 MIR4308-201ENST00000580634 81 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 MIR4753-201ENST00000585119 83 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 AC072026.1-201ENST00000605023 201 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP48Q86UV5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.49□□□□□ -1.85
USP48Q86UV5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.49□□□□□ -1.85
USP48Q86UV5 AC096644.4-201ENST00000563417 2912 ntBASIC3.49□□□□□ -1.85
USP48Q86UV5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.49□□□□□ -1.85
USP48Q86UV5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP48Q86UV5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms