Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 RNU1-22P-201ENST00000363334 158 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 MIR181B1-201ENST00000385240 110 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 MIR1294-201ENST00000408503 142 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 SNORA57.3-201ENST00000411095 141 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 AC016909.1-201ENST00000415916 166 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 EIF4EP4-201ENST00000424916 578 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 SNRPGP5-201ENST00000456003 220 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 RPL30P14-201ENST00000482744 348 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 Y_RNA.685-201ENST00000516532 108 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 RNA5SP164-201ENST00000516533 110 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 AC109329.2-201ENST00000519658 482 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 MIR3944-201ENST00000581277 108 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 JPX_2.1-201ENST00000614161 69 ntBASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LYSMD3Q7Z3D4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-234P-201ENST00000365229 104 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 snoU13.22-201ENST00000459428 104 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 RPL32P34-201ENST00000486380 400 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 AC011406.1-201ENST00000512440 370 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-948P-201ENST00000516374 107 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 uc_338.14-201ENST00000613162 166 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 U6.73-201ENST00000619194 103 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 AC090517.3-201ENST00000625170 141 ntBASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.78□□□□□ -1.8
LYSMD3Q7Z3D4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
LYSMD3Q7Z3D4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD31B-201ENST00000364977 69 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 Y_RNA.362-201ENST00000365518 110 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-418P-201ENST00000384035 107 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD61-201ENST00000384252 73 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-820P-201ENST00000384273 107 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 MIR450A2-201ENST00000385022 100 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AL117342.1-201ENST00000404861 406 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 SNORA19.1-201ENST00000410656 129 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC008134.1-201ENST00000420943 193 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 GOT2P5-201ENST00000433995 546 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC097462.1-201ENST00000514125 324 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 SCARNA15-202ENST00000516881 127 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-1270P-201ENST00000517128 108 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 SNORA51-201ENST00000606420 132 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC013412.1-201ENST00000610687 192 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 AC012442.3-202ENST00000636742 206 ntBASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LYSMD3Q7Z3D4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 Y_RNA.198-201ENST00000364013 98 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 DBIP2-201ENST00000419076 262 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 AC097463.2-201ENST00000421074 142 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 MRPS17P9-201ENST00000511924 393 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 RNU7-172P-201ENST00000517125 64 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 MIR5009-201ENST00000578736 100 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 AC009487.4-201ENST00000624969 3585 ntBASIC3.76□□□□□ -1.81
LYSMD3Q7Z3D4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 RNY4P6-201ENST00000363667 96 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms