Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 RNU1-139P-201ENST00000391307 165 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 USP9YP16-201ENST00000430287 407 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 MTND4P19-201ENST00000446659 478 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 USP9YP23-201ENST00000455085 407 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC091179.3-201ENST00000474761 144 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 RNU6-976P-201ENST00000516086 111 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC022868.1-201ENST00000517767 391 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AK6P2-201ENST00000549020 471 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC090617.3-201ENST00000573670 475 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 MIR5006-201ENST00000583027 110 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AL356055.1-201ENST00000602528 446 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 MZT1P2-201ENST00000604387 248 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 AC006157.1-201ENST00000611750 366 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 MIR4272-201ENST00000635924 64 ntBASIC1.8□□□□□ -2.12
CDHR3Q6ZTQ4 MIR340-201ENST00000362125 95 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 SNORA22B-201ENST00000383876 138 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 SNORA67.2-201ENST00000384300 149 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RNU6-160P-201ENST00000384591 107 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 MCFD2P1-201ENST00000417812 300 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 MTND2P29-201ENST00000438595 412 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 SNORA25.14-201ENST00000516481 132 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 SNORD116.3-201ENST00000517176 78 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 RN7SKP295-201ENST00000517264 153 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 7SK.7-201ENST00000603504 247 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AL590240.4-201ENST00000616908 390 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 AC134503.1-201ENST00000633048 54 ntBASIC1.79□□□□□ -2.12
CDHR3Q6ZTQ4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AC091812.1-201ENST00000432235 1948 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 MIR329-1-201ENST00000385028 80 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 MIR625-201ENST00000385047 85 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 SNORA69.1-201ENST00000390904 137 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 MIR548P-201ENST00000408336 84 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 RNU6-1137P-201ENST00000517073 99 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AC093023.1-201ENST00000547375 507 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 AC005296.1-201ENST00000616145 209 ntBASIC1.78□□□□□ -2.12
CDHR3Q6ZTQ4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CDHR3Q6ZTQ4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 RNA5SP432-201ENST00000362480 116 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 SNORD114-6-201ENST00000364393 72 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC114482.1-201ENST00000418010 247 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC099799.1-201ENST00000439809 192 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AL163540.1-201ENST00000485382 386 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 MRPS17P9-201ENST00000511924 393 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 RNU6-548P-201ENST00000517083 115 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 RRN3P3-201ENST00000549207 578 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC006600.1-201ENST00000572529 153 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 MIR5188-201ENST00000583467 113 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AL109918.3-201ENST00000603072 338 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDHR3Q6ZTQ4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.76□□□□□ -2.13
CDHR3Q6ZTQ4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms