Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-768P-201ENST00000384683 107 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 PRSS3P4-201ENST00000453323 162 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 RPS26P55-201ENST00000471178 356 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 RNU6-63P-201ENST00000516690 95 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AC109329.2-201ENST00000519658 482 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 POLR3GP1-201ENST00000594073 261 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AL031274.2-201ENST00000599419 203 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 UCA1.1-201ENST00000620952 75 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AC012640.5-201ENST00000623897 319 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 AC091152.2-201ENST00000591628 2569 ntBASIC3.15□□□□□ -1.91
RNF111Q6ZNA4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RNU6-486P-201ENST00000363116 107 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RNU6-271P-201ENST00000363858 105 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SNORA14A-201ENST00000364773 135 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SNORD116-14-201ENST00000383894 92 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SNORD116-17-201ENST00000383929 92 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SNORD116-15-201ENST00000384445 92 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 SNORD116-19-201ENST00000384729 92 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RNU6-460P-201ENST00000391158 108 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 Y_RNA.622-201ENST00000411091 108 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RNU7-197P-201ENST00000458836 62 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 RPL23AP54-201ENST00000495129 419 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC010598.1-201ENST00000510378 103 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AL359881.1-201ENST00000602916 267 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AP003357.1-201ENST00000604497 148 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 AC002064.3-201ENST00000623448 346 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 MIR6844-201ENST00000637122 62 ntBASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF111Q6ZNA4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RNA5SP72-201ENST00000364442 117 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 MIR539-201ENST00000365690 78 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RNU6-975P-201ENST00000384296 105 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 MIR23A-201ENST00000385245 73 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 CYCSP49-201ENST00000420810 319 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RNU6-221P-201ENST00000459541 99 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC092991.1-201ENST00000477176 376 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RNA5SP20-201ENST00000515976 84 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC127455.1-201ENST00000565496 145 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 MIR3944-201ENST00000581277 108 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC011603.4-201ENST00000611325 277 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF111Q6ZNA4 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 RNU6-588P-201ENST00000410281 105 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 AL135786.1-201ENST00000415892 214 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 RPS27P1-201ENST00000450552 247 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 AC005972.2-201ENST00000604690 348 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 AC096577.2-201ENST00000611455 153 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF111Q6ZNA4 SNORA63.1-201ENST00000362493 131 ntBASIC3.11□□□□□ -1.91
RNF111Q6ZNA4 RNU1-72P-201ENST00000362976 153 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms