Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.37□□□□□ -2.47
CCDC171Q6TFL3 AC023157.2-201ENST00000540596 141 ntBASIC-0.37□□□□□ -2.47
CCDC171Q6TFL3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.37□□□□□ -2.47
CCDC171Q6TFL3 AL008636.1-201ENST00000625038 1018 ntBASIC-0.37□□□□□ -2.47
CCDC171Q6TFL3 AL445984.1-201ENST00000637834 659 ntBASIC-0.37□□□□□ -2.47
CCDC171Q6TFL3 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 HMGN2P26-201ENST00000463169 339 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNA5SP94-201ENST00000516917 108 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU1-117P-201ENST00000517041 158 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU6-58P-201ENST00000517143 103 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU6-323P-201ENST00000521915 107 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 MIR548AO-201ENST00000579992 96 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 Pinc.1-201ENST00000616452 154 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 SNORA2A-201ENST00000383885 135 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 MIR593-201ENST00000384856 100 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 MIR891A-201ENST00000401237 79 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNA5SP95-201ENST00000410319 137 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU6-387P-201ENST00000411331 105 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AL392103.1-201ENST00000447000 198 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU6-977P-201ENST00000516411 103 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 RNU2-56P-201ENST00000516826 190 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 MIR8076-201ENST00000611401 83 ntBASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.38□□□□□ -2.47
CCDC171Q6TFL3 AL589826.1-201ENST00000340697 249 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNU6-833P-201ENST00000363486 107 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNU6-137P-201ENST00000363680 108 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 SNORD116-12-201ENST00000384468 92 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNA5SP482-201ENST00000391269 118 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC010587.1-201ENST00000505809 469 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC010493.1-201ENST00000513479 292 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 RNU2-46P-201ENST00000517038 113 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC104383.1-201ENST00000530297 370 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC025449.1-201ENST00000603896 529 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 AC112187.2-201ENST00000604345 283 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 uc_338.16-201ENST00000621804 95 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 MIR1295B-201ENST00000636144 60 ntBASIC-0.39□□□□□ -2.47
CCDC171Q6TFL3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 RNU4-1-201ENST00000363925 141 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 SNORA8.2-201ENST00000384372 139 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 SNORA8.3-201ENST00000384679 139 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 MIR643-201ENST00000385267 97 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 MIR1302-7-201ENST00000408841 72 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 RNU2-59P-201ENST00000410482 191 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 RPS24P1-201ENST00000438550 371 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 RNA5SP454-201ENST00000517231 127 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 AC093027.1-201ENST00000546698 429 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 AC068790.2-201ENST00000602601 557 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 AC010999.1-201ENST00000611856 324 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 AC240442.1-201ENST00000616055 283 ntBASIC-0.4□□□□□ -2.47
CCDC171Q6TFL3 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 RNU6-179P-201ENST00000363350 107 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 RNU6-715P-201ENST00000365204 103 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 SNORD115-7-201ENST00000365306 82 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 SNORD116.1-201ENST00000365628 92 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 AC119618.1-201ENST00000434191 222 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 Z98949.2-201ENST00000440996 144 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 AC007215.1-201ENST00000464893 276 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 SNORA74.3-201ENST00000517108 154 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 MIR4438-201ENST00000585271 93 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 AL121895.2-201ENST00000619558 447 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 AC126544.2-201ENST00000625174 749 ntBASIC-0.41□□□□□ -2.48
CCDC171Q6TFL3 ZNF204P-201ENST00000416749 2397 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 PCNPP3-201ENST00000393579 471 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 MIR1185-2-201ENST00000408687 86 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 ZNF885P-201ENST00000420174 1098 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 MIR4764-201ENST00000580680 88 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 AC013244.3-201ENST00000605614 388 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 RNU4-5P-201ENST00000607255 135 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 uc_338.6-201ENST00000613544 171 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 AP000943.4-201ENST00000622912 357 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 AC008873.1-201ENST00000625051 138 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.42□□□□□ -2.48
CCDC171Q6TFL3 SNORA1B-201ENST00000362535 133 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms