Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
CASC4Q6P4E1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CASC4Q6P4E1 MTND5P16-201ENST00000460269 1703 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 MTND5P35-201ENST00000557537 1720 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CASC4Q6P4E1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 RNU6-874P-201ENST00000362390 105 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 RNU6-845P-201ENST00000362578 103 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 RNU6-876P-201ENST00000391295 104 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.57□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC091144.1-201ENST00000519573 138 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC105029.1-201ENST00000520250 669 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC093023.1-201ENST00000547375 507 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 FRG2DP-202ENST00000566967 323 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC005668.1-201ENST00000571142 476 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AC125232.2-201ENST00000592457 143 ntBASIC1.57□□□□□ -2.16
CASC4Q6P4E1 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 RNY1P16-201ENST00000363063 111 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 RNU6-331P-201ENST00000384724 107 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 MT-TL1-201ENST00000386347 75 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 RNA5SP323-201ENST00000391094 133 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 PDCL2P1-201ENST00000419302 352 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 MTND4P18-201ENST00000447010 465 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 snoU13.27-201ENST00000459278 104 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AL163195.1-201ENST00000496941 348 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AC024995.1-201ENST00000523014 93 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AL121579.1-201ENST00000555129 305 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 U6.108-201ENST00000637764 58 ntBASIC1.56□□□□□ -2.16
CASC4Q6P4E1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.55□□□□□ -2.16
CASC4Q6P4E1 RNU6-203P-201ENST00000384038 104 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 RNU6-700P-201ENST00000391043 107 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 EIF1P2-201ENST00000428233 350 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 MTND4P17-201ENST00000470444 350 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 AC116353.2-201ENST00000505332 712 ntBASIC1.55□□□□□ -2.16
CASC4Q6P4E1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
CASC4Q6P4E1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNU6-271P-201ENST00000363858 105 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNA5SP109-201ENST00000391010 116 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNU4-14P-201ENST00000410858 122 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 MTCYBP10-201ENST00000424905 650 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AL591806.2-201ENST00000433122 173 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AC005002.2-201ENST00000438228 269 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNU7-87P-201ENST00000459343 62 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AC090617.3-201ENST00000573670 475 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AC104984.5-201ENST00000586878 94 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 AL359075.3-201ENST00000613288 217 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.54□□□□□ -2.16
CASC4Q6P4E1 PISRT1.1-201ENST00000616930 107 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CASC4Q6P4E1 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
CASC4Q6P4E1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CASC4Q6P4E1 MIR302D-201ENST00000362275 68 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 MIR329-1-201ENST00000385028 80 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 SNORA75.4-201ENST00000391278 119 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 FGF7P8-201ENST00000402994 292 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 RPS27P1-201ENST00000450552 247 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 U8.22-201ENST00000459141 133 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 HMGN1P12-201ENST00000499125 195 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 RNU6-107P-201ENST00000516643 102 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 RNU1-142P-201ENST00000516682 145 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.53□□□□□ -2.16
CASC4Q6P4E1 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
CASC4Q6P4E1 AC022432.1-201ENST00000595739 310 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms