Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 FTH1P12-201ENST00000432137 551 ntBASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 HMGN2P34-201ENST00000437647 269 ntBASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 AL645939.4-201ENST00000604495 135 ntBASIC1.98□□□□□ -2.09
CCDC30Q5VVM6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 RNU1-42P-201ENST00000364033 160 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 SNORA63D-201ENST00000364359 132 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 SNORA75.4-201ENST00000391278 119 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 AC098614.3-201ENST00000438957 440 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 Y_RNA.683-201ENST00000516508 93 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 RNA5SP481-201ENST00000516814 122 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 MIR5695-201ENST00000579717 85 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 AC006001.4-201ENST00000622243 395 ntBASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCDC30Q5VVM6 Y_RNA.404-201ENST00000383978 102 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 Y_RNA.415-201ENST00000384012 112 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 RNU6-360P-201ENST00000390944 104 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 MIR1323-201ENST00000408090 73 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 MIR1253-201ENST00000408273 105 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 RNU4-62P-201ENST00000410125 130 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 AL445305.1-201ENST00000432577 575 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 UBE2V1P7-201ENST00000446395 340 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 RPL7P42-201ENST00000481005 679 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 AC025465.3-201ENST00000510570 311 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 AC024995.1-201ENST00000523014 93 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 AK6P2-201ENST00000549020 471 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 MTND5P16-201ENST00000460269 1703 ntBASIC1.96□□□□□ -2.1
CCDC30Q5VVM6 WWP1P1-201ENST00000466609 2769 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 MTND5P35-201ENST00000557537 1720 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 SNORD87-201ENST00000364849 89 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 SNORA67.6-201ENST00000391093 99 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 AC016909.1-201ENST00000415916 166 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 EIF1P2-201ENST00000428233 350 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 HMGN1P12-201ENST00000499125 195 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 HMGN1P13-201ENST00000505795 138 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CCDC30Q5VVM6 RNU6-727P-201ENST00000363592 107 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 RNA5SP363-201ENST00000365072 115 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 Y_RNA.638-201ENST00000459374 113 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 AC027575.1-201ENST00000481064 460 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 RPL17P19-201ENST00000489069 552 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 RPL36AP21-201ENST00000490372 323 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 AC093023.1-201ENST00000547375 507 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 MZT1P2-201ENST00000604387 248 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 AC092794.2-201ENST00000620933 563 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 AL669831.3-213ENST00000636676 183 ntBASIC1.94□□□□□ -2.1
CCDC30Q5VVM6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 RNU6-222P-201ENST00000362438 107 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 RNU6-1283P-201ENST00000365314 105 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 MIR934-201ENST00000401241 83 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 RNU2-7P-201ENST00000410794 178 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 TOMM22P2-201ENST00000430735 237 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 SCARNA16.2-201ENST00000516520 172 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 AC015720.1-201ENST00000565251 277 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 AC016727.1-205ENST00000605437 569 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 AL355073.2-201ENST00000612106 557 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 AC025253.1-201ENST00000613623 543 ntBASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC30Q5VVM6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 RNU6-414P-201ENST00000363705 104 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 RNU4-13P-201ENST00000364019 141 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 RNU6-331P-201ENST00000384724 107 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 BTF3P4-201ENST00000418852 495 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 AL353997.1-201ENST00000432936 108 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 HSPE1P9-201ENST00000440046 311 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 MTND4P18-201ENST00000447010 465 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 SNORA31.24-201ENST00000517232 57 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 RNA5SP437-201ENST00000517249 129 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 AC004584.2-201ENST00000570407 410 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 MIR5690-201ENST00000583739 73 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 AC022432.1-201ENST00000595739 310 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
CCDC30Q5VVM6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC30Q5VVM6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms