Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RTN1Q16799 RNU4-41P-201ENST00000364426 143 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNA5SP72-201ENST00000364442 117 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNA5SP267-201ENST00000364893 126 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNU6-1274P-201ENST00000384557 107 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNVU1-14-201ENST00000384770 164 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 AL512604.1-201ENST00000404812 257 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 AL353705.1-201ENST00000433468 480 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN1Q16799 AC083906.5-201ENST00000503722 328 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RN7SKP179-201ENST00000516126 217 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNA5SP76-201ENST00000516277 87 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 RNU6-63P-201ENST00000516690 95 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 AC109329.2-201ENST00000519658 482 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 MIR3613-201ENST00000579844 87 ntBASIC3.78□□□□□ -1.8
RTN1Q16799 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN1Q16799 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
RTN1Q16799 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RTN1Q16799 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN1Q16799 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN1Q16799 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTN1Q16799 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN1Q16799 SNORA63.1-201ENST00000362493 131 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 RNA5SP295-201ENST00000362655 121 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 RNU6-486P-201ENST00000363116 107 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 RNU6-944P-201ENST00000364023 107 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 Y_RNA.251-201ENST00000364551 99 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN1Q16799 RNU6-1080P-201ENST00000383982 107 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 RNU6-1083P-201ENST00000384022 107 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 RNA5SP496-201ENST00000391240 109 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 SNRPGP8-201ENST00000454064 226 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 AC080013.2-201ENST00000460866 323 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 ATP5EP1-201ENST00000510257 156 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN1Q16799 MIR2682-201ENST00000580305 110 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 MIR378D2-201ENST00000580636 98 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 AC120024.3-201ENST00000603167 156 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 AC012531.5-201ENST00000611375 151 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
RTN1Q16799 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN1Q16799 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN1Q16799 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN1Q16799 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN1Q16799 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN1Q16799 RNU4-13P-201ENST00000364019 141 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 RNU6-1082P-201ENST00000364574 107 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 RNU6-597P-201ENST00000365620 102 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 SNORA22-201ENST00000383907 134 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 MIR181A2-201ENST00000384863 110 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 Y_RNA.584-201ENST00000391090 114 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 MIR1278-201ENST00000408753 81 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 RN7SKP101-201ENST00000411376 320 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 AC115115.1-201ENST00000449927 248 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 RN7SL601P-201ENST00000471221 293 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 SCARNA20.6-201ENST00000517251 106 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 AC093331.1-201ENST00000521474 169 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.76□□□□□ -1.81
RTN1Q16799 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 AC073476.4-201ENST00000628409 72 ntBASIC3.76□□□□□ -1.81
RTN1Q16799 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.76□□□□□ -1.81
RTN1Q16799 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN1Q16799 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN1Q16799 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
RTN1Q16799 RNU6-674P-201ENST00000363831 107 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 SNORD31B-201ENST00000364977 69 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 RNU6-1064P-201ENST00000410626 104 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN1Q16799 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN1Q16799 AC009414.1-201ENST00000427200 443 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN1Q16799 AC245047.4-201ENST00000433189 144 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN1Q16799 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RTN1Q16799 RAC1P5-201ENST00000512182 576 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 AC090049.2-201ENST00000550377 109 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 MIR4679-2-201ENST00000578358 77 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 AC096577.2-201ENST00000611455 153 ntBASIC3.75□□□□□ -1.81
RTN1Q16799 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN1Q16799 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN1Q16799 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RTN1Q16799 RNU6-235P-201ENST00000362644 107 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 Y_RNA.563-201ENST00000384707 108 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 MIR34B-201ENST00000385076 84 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 RNA5SP120-201ENST00000410900 112 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 RNU6-948P-201ENST00000516374 107 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 AC104027.1-201ENST00000521887 300 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 AC013412.1-201ENST00000610687 192 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
RTN1Q16799 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN1Q16799 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RTN1Q16799 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTN1Q16799 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTN1Q16799 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTN1Q16799 AL021368.2-201ENST00000606125 5352 ntBASIC3.73□□□□□ -1.81
RTN1Q16799 Y_RNA.432-201ENST00000384087 111 ntBASIC3.73□□□□□ -1.81
RTN1Q16799 RNA5SP511-201ENST00000410487 115 ntBASIC3.73□□□□□ -1.81
RTN1Q16799 AC016925.1-201ENST00000458303 298 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms