Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
ECM1Q16610 AC017071.1-201ENST00000564407 2204 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECM1Q16610 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
ECM1Q16610 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ECM1Q16610 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.68□□□□□ -1.82
ECM1Q16610 Y_RNA.310-201ENST00000365063 113 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 MIR561-201ENST00000385216 97 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 MIR23A-201ENST00000385245 73 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RNU2-32P-201ENST00000411193 191 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RNU6-57P-201ENST00000411348 103 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 AC005326.1-201ENST00000429197 123 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RN7SL601P-201ENST00000471221 293 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RNU5E-3P-201ENST00000515913 68 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RNU7-116P-201ENST00000516940 62 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 AC021269.2-201ENST00000532318 330 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.68□□□□□ -1.82
ECM1Q16610 AL356280.1-201ENST00000603614 379 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 AC007179.3-201ENST00000604976 235 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 uc_338.1-201ENST00000612113 180 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.68□□□□□ -1.82
ECM1Q16610 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.68□□□□□ -1.82
ECM1Q16610 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
ECM1Q16610 TNPO1P3-201ENST00000436471 2662 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ECM1Q16610 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ECM1Q16610 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 SNORA20B-201ENST00000384220 132 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 MIR518C-201ENST00000384822 101 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 MIR626-201ENST00000385032 94 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 MIR526A2-201ENST00000390198 65 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 SNORA26.5-201ENST00000391215 123 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 RNU11-5P-201ENST00000391216 129 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 RNU6-381P-201ENST00000391259 108 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 RPL23AP7-203ENST00000449021 469 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 AC092991.1-201ENST00000477176 376 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.67□□□□□ -1.82
ECM1Q16610 RNA5SP490-201ENST00000517141 136 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 AC100767.1-201ENST00000528178 123 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 NDUFA5P6-201ENST00000542110 379 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 AC011603.4-201ENST00000611325 277 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 AC000403.1-201ENST00000613696 3585 ntBASIC3.67□□□□□ -1.82
ECM1Q16610 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
ECM1Q16610 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
ECM1Q16610 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
ECM1Q16610 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.66□□□□□ -1.82
ECM1Q16610 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ECM1Q16610 SNORD73B-201ENST00000364394 72 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 RNU6-1240P-201ENST00000365155 104 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ECM1Q16610 RNU6-578P-201ENST00000390980 103 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AL139095.1-201ENST00000404326 391 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.66□□□□□ -1.82
ECM1Q16610 RNU7-170P-201ENST00000459303 61 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AC146507.2-201ENST00000460608 476 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 RPL36AP21-201ENST00000490372 323 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.66□□□□□ -1.82
ECM1Q16610 AC107027.2-201ENST00000512197 115 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 RNA5SP76-201ENST00000516277 87 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 SCARNA20.6-201ENST00000517251 106 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AC090049.2-201ENST00000550377 109 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 MIR4724-201ENST00000579485 89 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 MIR4744-201ENST00000581563 82 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 MIR7112-201ENST00000616126 65 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ECM1Q16610 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.66□□□□□ -1.82
ECM1Q16610 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ECM1Q16610 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ECM1Q16610 Z83843.1-201ENST00000604070 3685 ntBASIC3.66□□□□□ -1.82
ECM1Q16610 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
ECM1Q16610 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ECM1Q16610 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.82
ECM1Q16610 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ECM1Q16610 MIR367-201ENST00000362299 68 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 SNORA27.1-201ENST00000362604 124 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 SNORD21-201ENST00000383953 95 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 MIR95-201ENST00000385072 81 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.65□□□□□ -1.83
ECM1Q16610 AL121890.1-201ENST00000435457 205 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 HMGN2P18-201ENST00000450680 270 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 SNORA48.11-201ENST00000517015 89 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 MIR2682-201ENST00000580305 110 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 AL355297.2-201ENST00000604792 129 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 U7.8-201ENST00000619968 63 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 MAPK10-362ENST00000641864 4484 ntBASIC3.65□□□□□ -1.83
ECM1Q16610 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ECM1Q16610 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.65□□□□□ -1.83
ECM1Q16610 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
ECM1Q16610 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.64□□□□□ -1.83
ECM1Q16610 RNU6-407P-201ENST00000365280 104 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 SNORD14D-201ENST00000384390 87 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 SNORA48.5-201ENST00000391143 135 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 RNA5SP120-201ENST00000410900 112 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 RN7SKP284-201ENST00000411002 343 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AL158823.1-201ENST00000418441 478 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 MTCO1P44-201ENST00000441935 243 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms