Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RNU6-679P-201ENST00000391003 106 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 MIR1183-201ENST00000408856 89 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 RNU2-40P-201ENST00000410833 196 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 AC006011.1-201ENST00000442758 349 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 snoU13.28-201ENST00000459235 104 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 AC006445.1-201ENST00000491925 405 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 SNORD36C-201ENST00000516733 66 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 AL110115.1-201ENST00000614396 364 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 U4atac.1-201ENST00000618345 95 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 AC064859.1-201ENST00000624741 174 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 AC095038.3-201ENST00000634439 195 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXC1Q12948 AL365361.1-201ENST00000566942 3481 ntBASIC3.89□□□□□ -1.79
FOXC1Q12948 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXC1Q12948 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXC1Q12948 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXC1Q12948 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXC1Q12948 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXC1Q12948 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXC1Q12948 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
FOXC1Q12948 AC093908.1-201ENST00000623125 8092 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXC1Q12948 SNORA60-201ENST00000362396 134 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 RNA5SP97-201ENST00000365006 84 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
FOXC1Q12948 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXC1Q12948 RPL36AP48-201ENST00000485521 314 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 RPL32P34-201ENST00000486380 400 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 AC006064.5-201ENST00000541782 248 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
FOXC1Q12948 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXC1Q12948 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXC1Q12948 HSPE1P19-201ENST00000603327 295 ntBASIC3.88□□□□□ -1.79
FOXC1Q12948 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXC1Q12948 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXC1Q12948 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXC1Q12948 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 RNU6-50P-201ENST00000362356 103 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 RNA5SP307-201ENST00000362863 116 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 SNORD116-10-201ENST00000363791 102 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 SNORD115-28-201ENST00000363931 81 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 Y_RNA.191-201ENST00000363972 113 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 SNORD58A-201ENST00000383875 65 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 RNU4-69P-201ENST00000410677 143 ntBASIC3.87□□□□□ -1.79
FOXC1Q12948 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXC1Q12948 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
FOXC1Q12948 MAPK10-286ENST00000641208 8747 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
FOXC1Q12948 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 AC092435.4-201ENST00000623012 4159 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 RNU6-633P-201ENST00000362612 103 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 RNU6-1201P-201ENST00000384227 107 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 SNORA3.3-201ENST00000408712 125 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 RNA5SP129-201ENST00000410276 118 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 AL139247.1-201ENST00000422768 325 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 FTH1P12-201ENST00000432137 551 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 AC025750.2-201ENST00000442609 450 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 UBE2DNL-203ENST00000474922 222 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 AC106707.2-201ENST00000484182 374 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 RNU7-25P-201ENST00000516544 62 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 MIR4712-201ENST00000583750 82 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 MIR5684-201ENST00000585074 65 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 AC002984.1-201ENST00000591692 448 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 AC091932.4-201ENST00000623386 200 ntBASIC3.86□□□□□ -1.79
FOXC1Q12948 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
FOXC1Q12948 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXC1Q12948 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXC1Q12948 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXC1Q12948 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXC1Q12948 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
FOXC1Q12948 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXC1Q12948 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXC1Q12948 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXC1Q12948 Y_RNA.547-201ENST00000384654 119 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 MIR1911-201ENST00000410783 80 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 SNORA74C-2-201ENST00000411179 201 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 AC104333.2-201ENST00000422630 192 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 SNRPGP14-201ENST00000435400 219 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXC1Q12948 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 Vault.1-201ENST00000516474 102 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 AC091544.4-201ENST00000555268 342 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
FOXC1Q12948 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXC1Q12948 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXC1Q12948 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms