Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.48□□□□□ -2.01
DDR1Q08345 AC016632.1-201ENST00000503994 196 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 AC025465.3-201ENST00000510570 311 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 SNORA40.14-201ENST00000516543 86 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 RNU6-111P-201ENST00000517179 105 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 HSPE1P4-201ENST00000550617 308 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 AC012433.1-201ENST00000588916 398 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 AL078605.1-201ENST00000603529 500 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 SDR42E1P4-201ENST00000620894 481 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 U2.22-201ENST00000636441 106 ntBASIC2.48□□□□□ -2.01
DDR1Q08345 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDR1Q08345 AC233981.2-201ENST00000611524 1614 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
DDR1Q08345 AC092268.1-201ENST00000342691 405 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNU6-770P-201ENST00000363929 105 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 SNORA20.1-201ENST00000364790 130 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNA5SP190-201ENST00000365222 118 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNU6-1062P-201ENST00000383908 107 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNU6-17P-201ENST00000384245 107 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNU6-18P-201ENST00000384527 107 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 Y_RNA.562-201ENST00000384695 113 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
DDR1Q08345 AL445685.2-201ENST00000422551 342 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC092423.1-201ENST00000430165 186 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.47□□□□□ -2.01
DDR1Q08345 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RPL30P12-201ENST00000474666 353 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC104435.1-201ENST00000483483 166 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC090255.1-201ENST00000495779 349 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 RNU6-1023P-201ENST00000516137 106 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 SNORA48.11-201ENST00000517015 89 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.47□□□□□ -2.01
DDR1Q08345 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.47□□□□□ -2.01
DDR1Q08345 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.47□□□□□ -2.01
DDR1Q08345 MIR6840-201ENST00000611937 71 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC141273.2-201ENST00000618989 130 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC137590.2-201ENST00000619709 240 ntBASIC2.47□□□□□ -2.01
DDR1Q08345 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.46□□□□□ -2.01
DDR1Q08345 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
DDR1Q08345 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
DDR1Q08345 RNU6-212P-201ENST00000362642 104 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 SNORD27-201ENST00000363981 72 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 SNORA36A-201ENST00000384221 132 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 U8.10-201ENST00000384260 133 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 MIR215-201ENST00000384858 110 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 MIR186-201ENST00000384988 86 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
DDR1Q08345 RNU6-700P-201ENST00000391043 107 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RNU6-1093P-201ENST00000391194 107 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RNA5SP270-201ENST00000411361 118 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RPS26P42-201ENST00000413485 326 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.46□□□□□ -2.02
DDR1Q08345 LINC01399-202ENST00000458450 244 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 snoU13.30-201ENST00000458951 104 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RPL39P38-201ENST00000467018 153 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 HMGB3P3-201ENST00000510526 400 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RNU6-911P-201ENST00000516523 104 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 SNORA40.15-201ENST00000516884 107 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RNU7-4P-201ENST00000516961 62 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 AC115990.1-201ENST00000526957 301 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 AP003733.2-201ENST00000529409 171 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 RPL30P11-203ENST00000598995 310 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 AC130454.1-201ENST00000622948 401 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.46□□□□□ -2.02
DDR1Q08345 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
DDR1Q08345 MIRLET7G-201ENST00000362280 84 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 RNU6-655P-201ENST00000362858 107 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 Y_RNA.276-201ENST00000364732 109 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 RNA5SP37-201ENST00000365420 130 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 RNU6-142P-201ENST00000384019 107 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 Y_RNA.471-201ENST00000384312 102 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 Y_RNA.504-201ENST00000384481 104 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 Y_RNA.539-201ENST00000384635 107 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 Y_RNA.551-201ENST00000384661 102 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 MIR625-201ENST00000385047 85 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 MIR9-3-201ENST00000385084 90 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 MIR190B-201ENST00000401119 79 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 RNU2-14P-201ENST00000411053 191 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 AC007098.1-201ENST00000420122 367 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.45□□□□□ -2.02
DDR1Q08345 AC087477.1-201ENST00000465747 340 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.45□□□□□ -2.02
DDR1Q08345 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
DDR1Q08345 RNU5F-2P-201ENST00000516066 82 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.45□□□□□ -2.02
DDR1Q08345 AC021231.3-201ENST00000558497 370 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.45□□□□□ -2.02
DDR1Q08345 MIR3683-201ENST00000580847 82 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 VN1R91P-201ENST00000594377 169 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 AC078899.2-201ENST00000595282 212 ntBASIC2.45□□□□□ -2.02
DDR1Q08345 RMST_6.1-201ENST00000611980 203 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms