Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU7-116P-201ENST00000516940 62 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.47□□□□□ -1.85
SOX4Q06945 uc_338.14-201ENST00000613162 166 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 MIR3914-2-201ENST00000637339 95 ntBASIC3.47□□□□□ -1.85
SOX4Q06945 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
SOX4Q06945 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX4Q06945 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX4Q06945 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.47□□□□□ -1.85
SOX4Q06945 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
SOX4Q06945 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 RNU6-271P-201ENST00000363858 105 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 RNU6-755P-201ENST00000364400 103 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 SNORD65B-201ENST00000459126 73 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 RPS26P55-201ENST00000471178 356 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 RNU6-589P-201ENST00000516485 107 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 MIR4679-2-201ENST00000578358 77 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
SOX4Q06945 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.46□□□□□ -1.86
SOX4Q06945 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SOX4Q06945 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SOX4Q06945 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX4Q06945 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
SOX4Q06945 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SOX4Q06945 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX4Q06945 AL356292.1-201ENST00000283110 373 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 RNU4-41P-201ENST00000364426 143 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 SNORD14D-201ENST00000384390 87 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 MIR1283-1-201ENST00000408494 87 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 RN7SKP101-201ENST00000411376 320 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 AL135786.1-201ENST00000415892 214 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX4Q06945 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX4Q06945 AC010598.1-201ENST00000510378 103 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX4Q06945 RNU5E-3P-201ENST00000515913 68 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 RNU6-772P-201ENST00000516042 105 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 Y_RNA.692-201ENST00000516627 105 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 RNU6-197P-201ENST00000516680 100 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 RNA5SP170-201ENST00000517150 101 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 MIR3121-201ENST00000579680 77 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 MIR3613-201ENST00000579844 87 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 MIR4325-201ENST00000583049 90 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 AC008739.2-201ENST00000597006 317 ntBASIC3.45□□□□□ -1.86
SOX4Q06945 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX4Q06945 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX4Q06945 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX4Q06945 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX4Q06945 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX4Q06945 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
SOX4Q06945 MTND5P32-201ENST00000560711 1802 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SOX4Q06945 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SOX4Q06945 RNU6-674P-201ENST00000363831 107 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 SNORA40.5-201ENST00000391061 128 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 MIR300-201ENST00000401138 83 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 RNA5SP38-201ENST00000410750 119 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 AC097463.2-201ENST00000421074 142 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 AC016925.1-201ENST00000458303 298 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 RNU7-14P-201ENST00000459331 62 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 UBL5P2-201ENST00000583788 219 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 U6.95-201ENST00000636931 70 ntBASIC3.44□□□□□ -1.86
SOX4Q06945 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.44□□□□□ -1.86
SOX4Q06945 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SOX4Q06945 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX4Q06945 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
SOX4Q06945 AC002546.1-201ENST00000588041 2504 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX4Q06945 U8.1-201ENST00000362843 134 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 RNU6-978P-201ENST00000364371 103 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 RNU6-1080P-201ENST00000383982 107 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 Y_RNA.432-201ENST00000384087 111 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 SNORA7.4-201ENST00000384249 137 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 RNU2-55P-201ENST00000411146 174 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 EIF4EP4-201ENST00000424916 578 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 Z98742.2-201ENST00000431564 187 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX4Q06945 AL158147.1-201ENST00000443970 75 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 MIR449C-201ENST00000516047 92 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 RNU6-63P-201ENST00000516690 95 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 NDUFB9P3-201ENST00000521269 501 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 AC027419.1-201ENST00000522976 328 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 MIR4753-201ENST00000585119 83 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 RPL30P11-203ENST00000598995 310 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 AC108081.1-201ENST00000604358 221 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 AC093732.2-201ENST00000607950 274 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 uc_338.25-201ENST00000613756 156 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX4Q06945 snoZ196.1-201ENST00000625269 89 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX4Q06945 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX4Q06945 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
SOX4Q06945 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SOX4Q06945 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SOX4Q06945 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX4Q06945 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms