Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 UQCRBP2-201ENST00000447827 297 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 NDUFB4P10-201ENST00000452541 359 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 snoU13.23-201ENST00000458863 104 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 RNA5SP57-201ENST00000459463 123 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 AC011406.1-201ENST00000512440 370 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 AC091144.1-201ENST00000519573 138 ntBASIC1.86□□□□□ -2.11
CDK3Q00526 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDK3Q00526 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 RNU6-1145P-201ENST00000384246 107 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 Y_RNA.463-201ENST00000384271 102 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 Y_RNA.579-201ENST00000390939 94 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 MIR1185-2-201ENST00000408687 86 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 AL158823.1-201ENST00000418441 478 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 MTND4P28-201ENST00000426217 387 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.85□□□□□ -2.11
CDK3Q00526 RNU6-221P-201ENST00000459541 99 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 RPS27P21-201ENST00000486977 252 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 RN7SKP49-201ENST00000516675 260 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 MIR2355-201ENST00000517199 87 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
CDK3Q00526 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.85□□□□□ -2.11
CDK3Q00526 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 AL357075.2-201ENST00000614906 189 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
CDK3Q00526 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDK3Q00526 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CDK3Q00526 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CDK3Q00526 RNU6-1301P-201ENST00000362724 104 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 Y_RNA.428-201ENST00000384078 102 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 U3.40-201ENST00000408706 208 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AC007677.1-201ENST00000445757 515 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
CDK3Q00526 Y_RNA.661-201ENST00000516003 99 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 SNORD116.3-201ENST00000517176 78 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 CYCSP23-201ENST00000519781 313 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 MIR5094-201ENST00000578766 85 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 C8orf59P2-201ENST00000603441 271 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AL133255.1-201ENST00000606374 441 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 AP000553.5-201ENST00000641933 54 ntBASIC1.84□□□□□ -2.11
CDK3Q00526 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CDK3Q00526 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
CDK3Q00526 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CDK3Q00526 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
CDK3Q00526 RNU6-1115P-201ENST00000362490 106 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 Y_RNA.509-201ENST00000384506 99 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDK3Q00526 SNORD12B-201ENST00000410433 91 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC096644.2-201ENST00000429278 159 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC099677.2-201ENST00000436385 175 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.83□□□□□ -2.12
CDK3Q00526 PCNPP5-201ENST00000452246 481 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC027575.1-201ENST00000481064 460 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 RPL23AP63-201ENST00000498752 471 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC025647.1-201ENST00000517879 253 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 AC104985.2-201ENST00000620598 500 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.83□□□□□ -2.12
CDK3Q00526 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.83□□□□□ -2.12
CDK3Q00526 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CDK3Q00526 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.83□□□□□ -2.12
CDK3Q00526 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 Y_RNA.315-201ENST00000365117 102 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 Y_RNA.419-201ENST00000384041 102 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 MIR628-201ENST00000385229 95 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 MIR1253-201ENST00000408273 105 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 AC016909.1-201ENST00000415916 166 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 HMGN2P34-201ENST00000437647 269 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
CDK3Q00526 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.82□□□□□ -2.12
CDK3Q00526 AC005034.5-201ENST00000604219 466 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 U2.1-201ENST00000618978 145 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 MIR338-201ENST00000636369 67 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
CDK3Q00526 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDK3Q00526 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.81□□□□□ -2.12
CDK3Q00526 snoU2-30.2-201ENST00000362805 70 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 RNU6-1240P-201ENST00000365155 104 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 Y_RNA.431-201ENST00000384086 102 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
CDK3Q00526 AL117342.1-201ENST00000404861 406 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms