Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU4-53P-201ENST00000410828 140 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 AC099677.2-201ENST00000436385 175 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 AC018634.1-201ENST00000437554 401 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 UBE2DNL-203ENST00000474922 222 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 RNU6-408P-201ENST00000515910 100 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.79□□□□□ -2.12
CX3CL1P78423 AC023442.1-201ENST00000531247 422 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 MIR3171-201ENST00000584270 74 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.15-201ENST00000611544 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.16-201ENST00000613119 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.12-201ENST00000613778 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.20-201ENST00000613956 192 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.9-201ENST00000615427 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.11-201ENST00000616345 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.2-201ENST00000616535 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.3-201ENST00000617785 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.19-201ENST00000618602 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 RNU2-1-201ENST00000618664 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.6-201ENST00000619225 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.5-201ENST00000619465 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 U2.10-201ENST00000620268 191 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 AC022140.2-201ENST00000623500 188 ntBASIC1.79□□□□□ -2.12
CX3CL1P78423 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CX3CL1P78423 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CL1P78423 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CL1P78423 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CL1P78423 MTND4P1-201ENST00000457501 1466 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 snoU2-30.2-201ENST00000362805 70 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 Y_RNA.216-201ENST00000364205 93 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 SNORA22B-201ENST00000383876 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 Y_RNA.500-201ENST00000384466 111 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MRPL35P1-201ENST00000404272 572 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR1302-11-201ENST00000408051 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR1302-9-201ENST00000408365 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR1302-10-201ENST00000408734 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MTND1P14-201ENST00000427400 950 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 HMGN2P34-201ENST00000437647 269 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MTCYBP6-201ENST00000441810 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 SNORA25.10-201ENST00000515926 124 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.78□□□□□ -2.12
CX3CL1P78423 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR4659A-201ENST00000580269 81 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 AC044792.1-201ENST00000593294 196 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR1302-2-201ENST00000607096 138 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR338-201ENST00000636369 67 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 AP000553.5-201ENST00000641933 54 ntBASIC1.78□□□□□ -2.12
CX3CL1P78423 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CX3CL1P78423 RNU6-1240P-201ENST00000365155 104 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 XGY1-201ENST00000381172 446 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 MIR221-201ENST00000385135 110 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 HMGN2P38-201ENST00000423806 265 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CL1P78423 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.77□□□□□ -2.13
CX3CL1P78423 AL163540.1-201ENST00000485382 386 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CL1P78423 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.77□□□□□ -2.13
CX3CL1P78423 RNU6-988P-201ENST00000519081 107 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.77□□□□□ -2.13
CX3CL1P78423 AC055872.1-201ENST00000570978 278 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 MIR5094-201ENST00000578766 85 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 RPS29P30-201ENST00000600975 111 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AC240442.1-201ENST00000616055 283 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 AC009831.4-201ENST00000620744 325 ntBASIC1.77□□□□□ -2.13
CX3CL1P78423 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CX3CL1P78423 RNU6-1266P-201ENST00000362794 105 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 SNORA33-201ENST00000363664 130 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 RNU6-454P-201ENST00000364292 107 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 Y_RNA.287-201ENST00000364853 94 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 RNU4-52P-201ENST00000384209 138 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 Y_RNA.645-201ENST00000391229 102 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 MIR1253-201ENST00000408273 105 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.76□□□□□ -2.13
CX3CL1P78423 RPL23AP3-201ENST00000453844 468 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 AC093852.1-201ENST00000503587 266 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 RNU6-1146P-201ENST00000516282 102 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 AC040926.1-201ENST00000530195 238 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.76□□□□□ -2.13
CX3CL1P78423 MIR4287-201ENST00000579398 78 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 SNORD53-201ENST00000579969 78 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 AL356055.1-201ENST00000602528 446 ntBASIC1.76□□□□□ -2.13
CX3CL1P78423 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.75□□□□□ -2.13
CX3CL1P78423 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CX3CL1P78423 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 Y_RNA.526-201ENST00000384572 110 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 RNU6-417P-201ENST00000384712 107 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 MRPL42P3-201ENST00000401492 326 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AL158823.1-201ENST00000418441 478 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.75□□□□□ -2.13
CX3CL1P78423 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
CX3CL1P78423 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CX3CL1P78423 AC022432.1-201ENST00000595739 310 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms