Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
RAE1P78406 snoZ196.1-201ENST00000625269 89 ntBASIC2.36□□□□□ -2.03
RAE1P78406 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RAE1P78406 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.36□□□□□ -2.03
RAE1P78406 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.35□□□□□ -2.03
RAE1P78406 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.35□□□□□ -2.03
RAE1P78406 AL391987.6-201ENST00000305671 199 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Y_RNA.14-201ENST00000362415 103 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Y_RNA.16-201ENST00000362421 102 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RNU6-525P-201ENST00000363685 104 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Y_RNA.188-201ENST00000363952 111 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Y_RNA.307-201ENST00000365022 117 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Y_RNA.350-201ENST00000365409 98 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RNU6-1235P-201ENST00000384559 107 ntBASIC2.35□□□□□ -2.03
RAE1P78406 SNORA53-201ENST00000391141 249 ntBASIC2.35□□□□□ -2.03
RAE1P78406 SRIP3-201ENST00000413200 219 ntBASIC2.35□□□□□ -2.03
RAE1P78406 AC123900.1-201ENST00000420390 96 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RPL23AP3-201ENST00000453844 468 ntBASIC2.35□□□□□ -2.03
RAE1P78406 MTND4LP30-201ENST00000454092 297 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RNU7-26P-201ENST00000458980 63 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RNU6-498P-201ENST00000459468 107 ntBASIC2.35□□□□□ -2.03
RAE1P78406 RPL39P38-201ENST00000467018 153 ntBASIC2.35□□□□□ -2.03
RAE1P78406 DEFB108E-201ENST00000524692 240 ntBASIC2.35□□□□□ -2.03
RAE1P78406 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.35□□□□□ -2.03
RAE1P78406 AC110588.1-201ENST00000559699 137 ntBASIC2.35□□□□□ -2.03
RAE1P78406 MIR3684-201ENST00000579779 74 ntBASIC2.35□□□□□ -2.03
RAE1P78406 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.35□□□□□ -2.03
RAE1P78406 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAE1P78406 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RAE1P78406 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.35□□□□□ -2.03
RAE1P78406 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RAE1P78406 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.35□□□□□ -2.03
RAE1P78406 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RAE1P78406 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAE1P78406 Y_RNA.136-201ENST00000363444 102 ntBASIC2.34□□□□□ -2.03
RAE1P78406 RNU6-326P-201ENST00000365480 107 ntBASIC2.34□□□□□ -2.03
RAE1P78406 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAE1P78406 POLR2KP2-201ENST00000438155 177 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.34□□□□□ -2.03
RAE1P78406 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.34□□□□□ -2.03
RAE1P78406 AL357134.1-201ENST00000445848 426 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
RAE1P78406 PRELID3BP1-201ENST00000457142 540 ntBASIC2.34□□□□□ -2.03
RAE1P78406 RNU6-221P-201ENST00000459541 99 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
RAE1P78406 SERF1AP1-201ENST00000514575 187 ntBASIC2.34□□□□□ -2.03
RAE1P78406 RNU6-948P-201ENST00000516374 107 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AC012433.1-201ENST00000588916 398 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AC008749.1-201ENST00000597650 306 ntBASIC2.34□□□□□ -2.03
RAE1P78406 AC037487.3-201ENST00000606668 112 ntBASIC2.34□□□□□ -2.03
RAE1P78406 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.34□□□□□ -2.03
RAE1P78406 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.34□□□□□ -2.04
RAE1P78406 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
RAE1P78406 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
RAE1P78406 SNORD115-30-201ENST00000364117 82 ntBASIC2.33□□□□□ -2.04
RAE1P78406 Y_RNA.383-201ENST00000383855 97 ntBASIC2.33□□□□□ -2.04
RAE1P78406 Y_RNA.447-201ENST00000384184 113 ntBASIC2.33□□□□□ -2.04
RAE1P78406 Y_RNA.569-201ENST00000384749 103 ntBASIC2.33□□□□□ -2.04
RAE1P78406 MIR548H3-201ENST00000408771 118 ntBASIC2.33□□□□□ -2.04
RAE1P78406 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
RAE1P78406 Z92545.1-201ENST00000411782 234 ntBASIC2.33□□□□□ -2.04
RAE1P78406 MTCO1P44-201ENST00000441935 243 ntBASIC2.33□□□□□ -2.04
RAE1P78406 SUMO1P2-201ENST00000452524 304 ntBASIC2.33□□□□□ -2.04
RAE1P78406 RNU2-31P-201ENST00000516954 155 ntBASIC2.33□□□□□ -2.04
RAE1P78406 RNU6-1271P-201ENST00000517049 105 ntBASIC2.33□□□□□ -2.04
RAE1P78406 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.33□□□□□ -2.04
RAE1P78406 MIR3671-201ENST00000580455 88 ntBASIC2.33□□□□□ -2.04
RAE1P78406 AC025754.2-201ENST00000606491 432 ntBASIC2.33□□□□□ -2.04
RAE1P78406 AC005828.6-201ENST00000606610 232 ntBASIC2.33□□□□□ -2.04
RAE1P78406 MTND5P6-201ENST00000422338 1798 ntBASIC2.33□□□□□ -2.04
RAE1P78406 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RAE1P78406 Y_RNA.99-201ENST00000363138 105 ntBASIC2.32□□□□□ -2.04
RAE1P78406 Y_RNA.243-201ENST00000364481 109 ntBASIC2.32□□□□□ -2.04
RAE1P78406 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
RAE1P78406 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
RAE1P78406 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
RAE1P78406 U3.40-201ENST00000408706 208 ntBASIC2.32□□□□□ -2.04
RAE1P78406 RNA5SP184-201ENST00000411071 108 ntBASIC2.32□□□□□ -2.04
RAE1P78406 RNU6-57P-201ENST00000411348 103 ntBASIC2.32□□□□□ -2.04
RAE1P78406 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.32□□□□□ -2.04
RAE1P78406 AC016717.1-201ENST00000448918 286 ntBASIC2.32□□□□□ -2.04
RAE1P78406 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.32□□□□□ -2.04
RAE1P78406 U2.14-201ENST00000615943 113 ntBASIC2.32□□□□□ -2.04
RAE1P78406 U6.115-201ENST00000636045 103 ntBASIC2.32□□□□□ -2.04
RAE1P78406 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RAE1P78406 MIR340-201ENST00000362125 95 ntBASIC2.31□□□□□ -2.04
RAE1P78406 RNA5SP68-201ENST00000363885 119 ntBASIC2.31□□□□□ -2.04
RAE1P78406 Y_RNA.418-201ENST00000384029 102 ntBASIC2.31□□□□□ -2.04
RAE1P78406 RNU6-418P-201ENST00000384035 107 ntBASIC2.31□□□□□ -2.04
RAE1P78406 Y_RNA.489-201ENST00000384410 101 ntBASIC2.31□□□□□ -2.04
RAE1P78406 AL031003.1-201ENST00000404229 172 ntBASIC2.31□□□□□ -2.04
RAE1P78406 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.31□□□□□ -2.04
RAE1P78406 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.31□□□□□ -2.04
RAE1P78406 MRPS10P1-201ENST00000448483 130 ntBASIC2.31□□□□□ -2.04
RAE1P78406 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.31□□□□□ -2.04
RAE1P78406 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.31□□□□□ -2.04
RAE1P78406 RNU6-856P-201ENST00000516959 98 ntBASIC2.31□□□□□ -2.04
RAE1P78406 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.31□□□□□ -2.04
RAE1P78406 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.31□□□□□ -2.04
RAE1P78406 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms