Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
USP46P62068 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP46P62068 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
USP46P62068 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
USP46P62068 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.1□□□□□ -1.75
USP46P62068 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
USP46P62068 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP46P62068 AL359837.1-201ENST00000381357 287 ntBASIC4.1□□□□□ -1.75
USP46P62068 SNORA26.2-201ENST00000390922 122 ntBASIC4.1□□□□□ -1.75
USP46P62068 MIR1251-201ENST00000408552 70 ntBASIC4.1□□□□□ -1.75
USP46P62068 SNRPGP3-201ENST00000469405 227 ntBASIC4.1□□□□□ -1.75
USP46P62068 RPL39P34-201ENST00000477141 156 ntBASIC4.1□□□□□ -1.75
USP46P62068 AC011406.1-201ENST00000512440 370 ntBASIC4.1□□□□□ -1.75
USP46P62068 AC087499.8-201ENST00000578406 226 ntBASIC4.1□□□□□ -1.75
USP46P62068 MIR4429-201ENST00000580105 73 ntBASIC4.1□□□□□ -1.75
USP46P62068 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
USP46P62068 AC034229.5-201ENST00000624258 185 ntBASIC4.1□□□□□ -1.75
USP46P62068 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.1□□□□□ -1.75
USP46P62068 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP46P62068 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.1□□□□□ -1.75
USP46P62068 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP46P62068 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP46P62068 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP46P62068 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP46P62068 RNU6-1014P-201ENST00000383940 103 ntBASIC4.09□□□□□ -1.75
USP46P62068 U8.11-201ENST00000384699 133 ntBASIC4.09□□□□□ -1.75
USP46P62068 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
USP46P62068 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.09□□□□□ -1.75
USP46P62068 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.09□□□□□ -1.75
USP46P62068 U8.18-201ENST00000459285 133 ntBASIC4.09□□□□□ -1.75
USP46P62068 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
USP46P62068 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
USP46P62068 CYCSP30-201ENST00000546447 172 ntBASIC4.09□□□□□ -1.75
USP46P62068 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.09□□□□□ -1.75
USP46P62068 AL035470.1-201ENST00000622571 220 ntBASIC4.09□□□□□ -1.75
USP46P62068 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP46P62068 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP46P62068 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP46P62068 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
USP46P62068 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP46P62068 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USP46P62068 Y_RNA.49-201ENST00000362714 112 ntBASIC4.08□□□□□ -1.76
USP46P62068 RNU6-888P-201ENST00000363010 101 ntBASIC4.08□□□□□ -1.76
USP46P62068 SNORD24-201ENST00000383884 75 ntBASIC4.08□□□□□ -1.76
USP46P62068 RNU6-546P-201ENST00000383991 107 ntBASIC4.08□□□□□ -1.76
USP46P62068 MIR218-1-201ENST00000384999 110 ntBASIC4.08□□□□□ -1.76
USP46P62068 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.08□□□□□ -1.76
USP46P62068 RNY4P29-201ENST00000410801 97 ntBASIC4.08□□□□□ -1.76
USP46P62068 RNU2-32P-201ENST00000411193 191 ntBASIC4.08□□□□□ -1.76
USP46P62068 SNORA40.13-201ENST00000516379 120 ntBASIC4.08□□□□□ -1.76
USP46P62068 RNA5SP281-201ENST00000516504 135 ntBASIC4.08□□□□□ -1.76
USP46P62068 RNU6-1291P-201ENST00000516591 104 ntBASIC4.08□□□□□ -1.76
USP46P62068 AL589743.1-201ENST00000551932 2712 ntBASIC4.08□□□□□ -1.76
USP46P62068 AL596211.1-201ENST00000569873 2277 ntBASIC4.08□□□□□ -1.76
USP46P62068 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.08□□□□□ -1.76
USP46P62068 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.08□□□□□ -1.76
USP46P62068 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP46P62068 AC012442.3-202ENST00000636742 206 ntBASIC4.08□□□□□ -1.76
USP46P62068 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
USP46P62068 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP46P62068 AC091564.4-201ENST00000533934 2194 ntBASIC4.07□□□□□ -1.76
USP46P62068 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP46P62068 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP46P62068 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.07□□□□□ -1.76
USP46P62068 Y_RNA.253-201ENST00000364562 112 ntBASIC4.07□□□□□ -1.76
USP46P62068 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
USP46P62068 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
USP46P62068 EDDM3CP-201ENST00000415977 425 ntBASIC4.07□□□□□ -1.76
USP46P62068 AC244505.4-201ENST00000434905 287 ntBASIC4.07□□□□□ -1.76
USP46P62068 RPS15AP28-201ENST00000435088 386 ntBASIC4.07□□□□□ -1.76
USP46P62068 RPS12P18-201ENST00000442381 270 ntBASIC4.07□□□□□ -1.76
USP46P62068 SSXP5-201ENST00000443473 287 ntBASIC4.07□□□□□ -1.76
USP46P62068 U7.8-201ENST00000619968 63 ntBASIC4.07□□□□□ -1.76
USP46P62068 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP46P62068 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
USP46P62068 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
USP46P62068 AP003122.5-201ENST00000527668 3766 ntBASIC4.07□□□□□ -1.76
USP46P62068 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP46P62068 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USP46P62068 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.06□□□□□ -1.76
USP46P62068 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
USP46P62068 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP46P62068 RNU6-49P-201ENST00000384256 107 ntBASIC4.06□□□□□ -1.76
USP46P62068 RNU6-1113P-201ENST00000384348 107 ntBASIC4.06□□□□□ -1.76
USP46P62068 MIR23B-201ENST00000384832 97 ntBASIC4.06□□□□□ -1.76
USP46P62068 SNORD77.3-201ENST00000391113 65 ntBASIC4.06□□□□□ -1.76
USP46P62068 SNORA3.3-201ENST00000408712 125 ntBASIC4.06□□□□□ -1.76
USP46P62068 GOT2P5-201ENST00000433995 546 ntBASIC4.06□□□□□ -1.76
USP46P62068 RNU6-240P-201ENST00000516098 97 ntBASIC4.06□□□□□ -1.76
USP46P62068 RNU6-970P-201ENST00000516312 107 ntBASIC4.06□□□□□ -1.76
USP46P62068 AC068657.1-201ENST00000520807 306 ntBASIC4.06□□□□□ -1.76
USP46P62068 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
USP46P62068 U2.20-201ENST00000613956 192 ntBASIC4.06□□□□□ -1.76
USP46P62068 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
USP46P62068 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.05□□□□□ -1.76
USP46P62068 AC080128.1-201ENST00000474389 1917 ntBASIC4.05□□□□□ -1.76
USP46P62068 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP46P62068 SNORA62.3-201ENST00000365110 153 ntBASIC4.05□□□□□ -1.76
USP46P62068 Y_RNA.558-201ENST00000384685 113 ntBASIC4.05□□□□□ -1.76
USP46P62068 AL117342.1-201ENST00000404861 406 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms