Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RTP1P59025 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTP1P59025 RNU6-1048P-201ENST00000364054 107 ntBASIC3.33□□□□□ -1.88
RTP1P59025 snoU2_19.4-201ENST00000364329 80 ntBASIC3.33□□□□□ -1.88
RTP1P59025 RNU4-10P-201ENST00000364383 140 ntBASIC3.33□□□□□ -1.88
RTP1P59025 Y_RNA.243-201ENST00000364481 109 ntBASIC3.33□□□□□ -1.88
RTP1P59025 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
RTP1P59025 RNU6-417P-201ENST00000384712 107 ntBASIC3.33□□□□□ -1.88
RTP1P59025 MIR569-201ENST00000385228 96 ntBASIC3.33□□□□□ -1.88
RTP1P59025 RNU6-1154P-201ENST00000391001 104 ntBASIC3.33□□□□□ -1.88
RTP1P59025 CR769767.1-201ENST00000436337 346 ntBASIC3.33□□□□□ -1.88
RTP1P59025 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
RTP1P59025 RPS3P1-201ENST00000456781 192 ntBASIC3.33□□□□□ -1.88
RTP1P59025 RNU7-121P-201ENST00000516604 62 ntBASIC3.33□□□□□ -1.88
RTP1P59025 RNU2-44P-201ENST00000516795 194 ntBASIC3.33□□□□□ -1.88
RTP1P59025 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
RTP1P59025 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.33□□□□□ -1.88
RTP1P59025 MIR3684-201ENST00000579779 74 ntBASIC3.33□□□□□ -1.88
RTP1P59025 MIR4744-201ENST00000581563 82 ntBASIC3.33□□□□□ -1.88
RTP1P59025 AC090616.3-201ENST00000582184 217 ntBASIC3.33□□□□□ -1.88
RTP1P59025 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
RTP1P59025 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTP1P59025 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTP1P59025 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.32□□□□□ -1.88
RTP1P59025 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
RTP1P59025 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RTP1P59025 SNORA67.2-201ENST00000384300 149 ntBASIC3.32□□□□□ -1.88
RTP1P59025 SNORA22C-201ENST00000384614 134 ntBASIC3.32□□□□□ -1.88
RTP1P59025 MIR626-201ENST00000385032 94 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RNU6-750P-201ENST00000390946 107 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RNU6-257P-201ENST00000410238 98 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RNA5SP274-201ENST00000410484 108 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RNU6-735P-201ENST00000410612 107 ntBASIC3.32□□□□□ -1.88
RTP1P59025 EBAG9P1-201ENST00000418955 543 ntBASIC3.32□□□□□ -1.88
RTP1P59025 AC087499.2-201ENST00000432861 149 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RNU6-237P-201ENST00000515985 71 ntBASIC3.32□□□□□ -1.88
RTP1P59025 RN7SKP164-201ENST00000516138 266 ntBASIC3.32□□□□□ -1.88
RTP1P59025 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.32□□□□□ -1.88
RTP1P59025 AC069294.1-201ENST00000608397 350 ntBASIC3.32□□□□□ -1.88
RTP1P59025 AL365222.1-201ENST00000614661 98 ntBASIC3.32□□□□□ -1.88
RTP1P59025 AL138880.2-201ENST00000616214 239 ntBASIC3.32□□□□□ -1.88
RTP1P59025 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.32□□□□□ -1.88
RTP1P59025 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTP1P59025 AC134026.1-201ENST00000623249 2239 ntBASIC3.32□□□□□ -1.88
RTP1P59025 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
RTP1P59025 AC008264.2-201ENST00000610193 3731 ntBASIC3.32□□□□□ -1.88
RTP1P59025 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTP1P59025 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
RTP1P59025 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.31□□□□□ -1.88
RTP1P59025 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
RTP1P59025 RNU6-1210P-201ENST00000363775 107 ntBASIC3.31□□□□□ -1.88
RTP1P59025 Y_RNA.287-201ENST00000364853 94 ntBASIC3.31□□□□□ -1.88
RTP1P59025 SNORA72.4-201ENST00000384174 132 ntBASIC3.31□□□□□ -1.88
RTP1P59025 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
RTP1P59025 RNU6-1168P-201ENST00000390831 104 ntBASIC3.31□□□□□ -1.88
RTP1P59025 RNU6-578P-201ENST00000390980 103 ntBASIC3.31□□□□□ -1.88
RTP1P59025 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.31□□□□□ -1.88
RTP1P59025 TOMM22P2-201ENST00000430735 237 ntBASIC3.31□□□□□ -1.88
RTP1P59025 AC010409.1-201ENST00000487382 476 ntBASIC3.31□□□□□ -1.88
RTP1P59025 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.31□□□□□ -1.88
RTP1P59025 RNU6-313P-201ENST00000516317 112 ntBASIC3.31□□□□□ -1.88
RTP1P59025 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.31□□□□□ -1.88
RTP1P59025 MIR4431-201ENST00000579990 94 ntBASIC3.31□□□□□ -1.88
RTP1P59025 AL391813.1-201ENST00000603098 260 ntBASIC3.31□□□□□ -1.88
RTP1P59025 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTP1P59025 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTP1P59025 AC100821.1-201ENST00000523153 2479 ntBASIC3.31□□□□□ -1.88
RTP1P59025 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTP1P59025 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
RTP1P59025 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTP1P59025 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RTP1P59025 RNU6-655P-201ENST00000362858 107 ntBASIC3.3□□□□□ -1.88
RTP1P59025 Y_RNA.293-201ENST00000364908 93 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
RTP1P59025 Y_RNA.572-201ENST00000384757 98 ntBASIC3.3□□□□□ -1.88
RTP1P59025 MIR196B-201ENST00000384852 84 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RNU6-710P-201ENST00000410424 105 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RNU2-52P-201ENST00000410680 190 ntBASIC3.3□□□□□ -1.88
RTP1P59025 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
RTP1P59025 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.3□□□□□ -1.88
RTP1P59025 SNORD109B-201ENST00000458961 67 ntBASIC3.3□□□□□ -1.88
RTP1P59025 SNORD109A-201ENST00000459128 67 ntBASIC3.3□□□□□ -1.88
RTP1P59025 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.3□□□□□ -1.88
RTP1P59025 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
RTP1P59025 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.3□□□□□ -1.88
RTP1P59025 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
RTP1P59025 U6.115-201ENST00000636045 103 ntBASIC3.3□□□□□ -1.88
RTP1P59025 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
RTP1P59025 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTP1P59025 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
RTP1P59025 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
RTP1P59025 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTP1P59025 snoU2_19.1-201ENST00000362361 80 ntBASIC3.29□□□□□ -1.88
RTP1P59025 RNU6-103P-201ENST00000363686 107 ntBASIC3.29□□□□□ -1.88
RTP1P59025 Y_RNA.361-201ENST00000365515 120 ntBASIC3.29□□□□□ -1.88
RTP1P59025 Y_RNA.368-201ENST00000365547 113 ntBASIC3.29□□□□□ -1.88
RTP1P59025 SNORA8.3-201ENST00000384679 139 ntBASIC3.29□□□□□ -1.88
RTP1P59025 SNORA12-201ENST00000391162 147 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms