Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC104260.1-201ENST00000616660 539 ntBASIC2.29□□□□□ -2.04
RHBDL3P58872 RNU6-414P-201ENST00000363705 104 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 RNA5SP323-201ENST00000391094 133 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 AC093019.1-201ENST00000443135 252 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 MIR2053-201ENST00000459295 91 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 AC084364.2-201ENST00000546924 395 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 AL137100.2-201ENST00000555786 315 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.28□□□□□ -2.04
RHBDL3P58872 AC022432.1-201ENST00000595739 310 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 AC103810.8-201ENST00000607347 118 ntBASIC2.28□□□□□ -2.04
RHBDL3P58872 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RHBDL3P58872 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
RHBDL3P58872 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU1-17P-201ENST00000363022 152 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-1264P-201ENST00000383891 107 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-296P-201ENST00000384608 107 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-310P-201ENST00000384655 107 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 Y_RNA.557-201ENST00000384680 107 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 MIR329-1-201ENST00000385028 80 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 MIR9-3-201ENST00000385084 90 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-360P-201ENST00000390944 104 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-1009P-201ENST00000390996 107 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 AC114482.1-201ENST00000418010 247 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 AC027575.1-201ENST00000481064 460 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RPS29P11-201ENST00000496507 171 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 RNU6-1213P-201ENST00000517075 94 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 MIR548S-201ENST00000581352 82 ntBASIC2.27□□□□□ -2.05
RHBDL3P58872 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RHBDL3P58872 Y_RNA.70-201ENST00000362886 110 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 SNORA63D-201ENST00000364359 132 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 Y_RNA.259-201ENST00000364619 101 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 Y_RNA.358-201ENST00000365491 99 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RHBDL3P58872 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 RNU2-20P-201ENST00000410425 191 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 Y_RNA.646-201ENST00000410980 101 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 RNU6-1001P-201ENST00000411265 100 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDL3P58872 AC245047.4-201ENST00000433189 144 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDL3P58872 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDL3P58872 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC022493.2-201ENST00000506122 481 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC008834.1-201ENST00000511612 175 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 RN7SKP49-201ENST00000516675 260 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC022868.1-201ENST00000517767 391 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC144568.1-201ENST00000520139 137 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC125232.2-201ENST00000592457 143 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AL359075.3-201ENST00000613288 217 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 MIR8074-201ENST00000615081 81 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 AC006435.5-201ENST00000624486 112 ntBASIC2.26□□□□□ -2.05
RHBDL3P58872 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDL3P58872 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RHBDL3P58872 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.26□□□□□ -2.05
RHBDL3P58872 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RHBDL3P58872 RNU6-99P-201ENST00000364721 107 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 RNU6-417P-201ENST00000384712 107 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 SNORA69.1-201ENST00000390904 137 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 AC016909.1-201ENST00000415916 166 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 AL445685.2-201ENST00000422551 342 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 MTND5P20-201ENST00000448677 143 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.25□□□□□ -2.05
RHBDL3P58872 PCNPP5-201ENST00000452246 481 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 RPL30P15-201ENST00000457129 321 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 HMGB3P17-201ENST00000504195 649 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 HSBP1P1-201ENST00000555205 166 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 FRG2DP-202ENST00000566967 323 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.25□□□□□ -2.05
RHBDL3P58872 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
RHBDL3P58872 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 MIR1302-1-201ENST00000637932 143 ntBASIC2.25□□□□□ -2.05
RHBDL3P58872 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RHBDL3P58872 RNU6-1145P-201ENST00000384246 107 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 RNU6-950P-201ENST00000384651 107 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 RNU11-5P-201ENST00000391216 129 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 MTCO2P27-201ENST00000420740 428 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 RNA5SP458-201ENST00000516188 119 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 AK6P2-201ENST00000549020 471 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 WWP1P1-201ENST00000466609 2769 ntBASIC2.24□□□□□ -2.05
RHBDL3P58872 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RHBDL3P58872 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RHBDL3P58872 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RHBDL3P58872 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
RHBDL3P58872 RNU6-874P-201ENST00000362390 105 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 Y_RNA.287-201ENST00000364853 94 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 RNU6-890P-201ENST00000384121 107 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RHBDL3P58872 RNU6-1156P-201ENST00000410365 100 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 AC099799.1-201ENST00000439809 192 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 HSPE1P9-201ENST00000440046 311 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 FGF7P4-201ENST00000509595 295 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 Y_RNA.702-201ENST00000516843 96 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 MIR1244-1-201ENST00000612829 85 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 MIR1244-3-201ENST00000635744 85 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 MIR1244-2-201ENST00000636449 85 ntBASIC2.23□□□□□ -2.05
RHBDL3P58872 MIR1244-4-202ENST00000636813 85 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms