Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC130454.1-201ENST00000622948 401 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN2P57739 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
CLDN2P57739 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN2P57739 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 SNORA3A-201ENST00000364113 130 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 Y_RNA.380-201ENST00000365663 111 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 Y_RNA.389-201ENST00000383924 113 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 Y_RNA.551-201ENST00000384661 102 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MIR764-201ENST00000390811 85 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RNU6-823P-201ENST00000391042 103 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MIR1185-2-201ENST00000408687 86 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 U8.20-201ENST00000459445 131 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN2P57739 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RNU6-107P-201ENST00000516643 102 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RNU6-856P-201ENST00000516959 98 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RNA5SP402-201ENST00000517148 110 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MIR4680-201ENST00000580906 66 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MIR4524B-201ENST00000581569 115 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MIR5194-201ENST00000582634 120 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 Y_RNA.772-201ENST00000606692 102 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 AC040896.1-201ENST00000613819 479 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 AC240442.1-201ENST00000616055 283 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN2P57739 AC080100.1-201ENST00000624239 5356 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 MTND4P1-201ENST00000457501 1466 ntBASIC2.12□□□□□ -2.07
CLDN2P57739 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN2P57739 RNU6-1164P-201ENST00000364428 107 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 RNU6-418P-201ENST00000384035 107 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 RNU6-926P-201ENST00000384075 107 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 RNU6-1310P-201ENST00000384153 107 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 Y_RNA.455-201ENST00000384230 98 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN2P57739 AL591806.2-201ENST00000433122 173 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 RNU6-221P-201ENST00000459541 99 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 RPL26P26-201ENST00000480251 434 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
CLDN2P57739 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN2P57739 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN2P57739 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
CLDN2P57739 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 Y_RNA.458-201ENST00000384240 102 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 Y_RNA.471-201ENST00000384312 102 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 MIR1252-201ENST00000408861 65 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN2P57739 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 RAB28P5-201ENST00000427490 651 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN2P57739 AC016717.1-201ENST00000448918 286 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN2P57739 RNU6-408P-201ENST00000515910 100 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 Y_RNA.715-201ENST00000517082 110 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN2P57739 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN2P57739 AC009127.3-201ENST00000570531 403 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 MIR4446-201ENST00000578505 67 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN2P57739 MIR3684-201ENST00000579779 74 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 ZNF271P-202ENST00000465539 1970 ntBASIC2.1□□□□□ -2.07
CLDN2P57739 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN2P57739 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 RNA5SP393-201ENST00000363423 117 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 SNORD114-6-201ENST00000364393 72 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 RNA5SP475-201ENST00000410568 110 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 RNU6-57P-201ENST00000411348 103 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 AL353689.1-201ENST00000438895 199 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 RPEP5-201ENST00000441137 268 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 SNORA31.15-201ENST00000516771 132 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN2P57739 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 AC022432.1-201ENST00000595739 310 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 AC007742.2-201ENST00000618226 398 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 FO624990.1-201ENST00000636373 85 ntBASIC2.09□□□□□ -2.07
CLDN2P57739 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN2P57739 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN2P57739 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 RNU6-23P-201ENST00000363283 107 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 Y_RNA.439-201ENST00000384119 94 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 RNU6-1160P-201ENST00000384546 104 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 RNU6-985P-201ENST00000410182 104 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 AC107222.1-201ENST00000510899 637 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 AC113195.1-201ENST00000579952 141 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 MIR4769-201ENST00000584126 77 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 AC078899.2-201ENST00000595282 212 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 AL109918.3-201ENST00000603072 338 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 AL355297.3-201ENST00000604082 446 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CLDN2P57739 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN2P57739 AC011476.5-201ENST00000615594 130 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 1173.8 ms