Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HMGN2P18-201ENST00000450680 270 ntBASIC2.74□□□□□ -1.97
PER3P56645 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
PER3P56645 AC016925.1-201ENST00000458303 298 ntBASIC2.74□□□□□ -1.97
PER3P56645 AC018868.1-201ENST00000491307 315 ntBASIC2.74□□□□□ -1.97
PER3P56645 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.74□□□□□ -1.97
PER3P56645 RNU6-191P-201ENST00000516295 94 ntBASIC2.74□□□□□ -1.97
PER3P56645 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.74□□□□□ -1.97
PER3P56645 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.74□□□□□ -1.97
PER3P56645 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.74□□□□□ -1.97
PER3P56645 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PER3P56645 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PER3P56645 Y_RNA.117-201ENST00000363294 101 ntBASIC2.73□□□□□ -1.97
PER3P56645 Y_RNA.275-201ENST00000364726 110 ntBASIC2.73□□□□□ -1.97
PER3P56645 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
PER3P56645 RNA5SP240-201ENST00000365355 128 ntBASIC2.73□□□□□ -1.97
PER3P56645 RNU6-975P-201ENST00000384296 105 ntBASIC2.73□□□□□ -1.97
PER3P56645 MIR627-201ENST00000384979 97 ntBASIC2.73□□□□□ -1.97
PER3P56645 AC063976.3-201ENST00000426849 329 ntBASIC2.73□□□□□ -1.97
PER3P56645 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
PER3P56645 RNU7-57P-201ENST00000459540 60 ntBASIC2.73□□□□□ -1.97
PER3P56645 SCGB1D5P-201ENST00000515134 247 ntBASIC2.73□□□□□ -1.97
PER3P56645 SNORA27.4-201ENST00000516650 95 ntBASIC2.73□□□□□ -1.97
PER3P56645 MIR4319-201ENST00000577285 85 ntBASIC2.73□□□□□ -1.97
PER3P56645 MIR3616-201ENST00000584070 92 ntBASIC2.73□□□□□ -1.97
PER3P56645 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
PER3P56645 AC037487.3-201ENST00000606668 112 ntBASIC2.73□□□□□ -1.97
PER3P56645 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.73□□□□□ -1.97
PER3P56645 U6.115-201ENST00000636045 103 ntBASIC2.73□□□□□ -1.97
PER3P56645 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.73□□□□□ -1.97
PER3P56645 Y_RNA.361-201ENST00000365515 120 ntBASIC2.72□□□□□ -1.97
PER3P56645 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PER3P56645 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
PER3P56645 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
PER3P56645 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.72□□□□□ -1.97
PER3P56645 AC016717.1-201ENST00000448918 286 ntBASIC2.72□□□□□ -1.97
PER3P56645 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.72□□□□□ -1.97
PER3P56645 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.72□□□□□ -1.97
PER3P56645 AC130289.1-201ENST00000577321 73 ntBASIC2.72□□□□□ -1.97
PER3P56645 AC005828.6-201ENST00000606610 232 ntBASIC2.72□□□□□ -1.97
PER3P56645 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.72□□□□□ -1.97
PER3P56645 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PER3P56645 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
PER3P56645 Y_RNA.122-201ENST00000363331 96 ntBASIC2.71□□□□□ -1.98
PER3P56645 RNU6-743P-201ENST00000364151 106 ntBASIC2.71□□□□□ -1.98
PER3P56645 RNU6-662P-201ENST00000384253 104 ntBASIC2.71□□□□□ -1.98
PER3P56645 Y_RNA.515-201ENST00000384535 112 ntBASIC2.71□□□□□ -1.98
PER3P56645 AL031003.1-201ENST00000404229 172 ntBASIC2.71□□□□□ -1.98
PER3P56645 AL139156.1-201ENST00000412785 841 ntBASIC2.71□□□□□ -1.98
PER3P56645 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
PER3P56645 SRIP1-201ENST00000489235 288 ntBASIC2.71□□□□□ -1.98
PER3P56645 CKS1BP2-201ENST00000497342 240 ntBASIC2.71□□□□□ -1.98
PER3P56645 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.71□□□□□ -1.98
PER3P56645 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.71□□□□□ -1.98
PER3P56645 RNU6-138P-201ENST00000515952 107 ntBASIC2.71□□□□□ -1.98
PER3P56645 RNU4-71P-201ENST00000516258 113 ntBASIC2.71□□□□□ -1.98
PER3P56645 MIR4753-201ENST00000585119 83 ntBASIC2.71□□□□□ -1.98
PER3P56645 AL355297.2-201ENST00000604792 129 ntBASIC2.71□□□□□ -1.98
PER3P56645 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.71□□□□□ -1.98
PER3P56645 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.98
PER3P56645 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PER3P56645 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
PER3P56645 RNU6-324P-201ENST00000363957 106 ntBASIC2.7□□□□□ -1.98
PER3P56645 Y_RNA.217-201ENST00000364214 105 ntBASIC2.7□□□□□ -1.98
PER3P56645 SNORD56.5-201ENST00000364281 72 ntBASIC2.7□□□□□ -1.98
PER3P56645 RNU6-418P-201ENST00000384035 107 ntBASIC2.7□□□□□ -1.98
PER3P56645 SNORA54-201ENST00000384281 123 ntBASIC2.7□□□□□ -1.98
PER3P56645 SNORD14D-201ENST00000384390 87 ntBASIC2.7□□□□□ -1.98
PER3P56645 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
PER3P56645 RNU2-63P-201ENST00000410792 194 ntBASIC2.7□□□□□ -1.98
PER3P56645 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.7□□□□□ -1.98
PER3P56645 AL135938.1-201ENST00000443141 297 ntBASIC2.7□□□□□ -1.98
PER3P56645 Y_RNA.641-201ENST00000459414 105 ntBASIC2.7□□□□□ -1.98
PER3P56645 RNU6-221P-201ENST00000459541 99 ntBASIC2.7□□□□□ -1.98
PER3P56645 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
PER3P56645 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.7□□□□□ -1.98
PER3P56645 MIR4282-201ENST00000583613 67 ntBASIC2.7□□□□□ -1.98
PER3P56645 AL162424.1-201ENST00000602325 221 ntBASIC2.7□□□□□ -1.98
PER3P56645 AC011921.3-201ENST00000605540 361 ntBASIC2.7□□□□□ -1.98
PER3P56645 AL442067.1-201ENST00000613261 223 ntBASIC2.7□□□□□ -1.98
PER3P56645 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.7□□□□□ -1.98
PER3P56645 snoZ196.1-201ENST00000625269 89 ntBASIC2.7□□□□□ -1.98
PER3P56645 AP006437.1-201ENST00000641440 3685 ntBASIC2.7□□□□□ -1.98
PER3P56645 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PER3P56645 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
PER3P56645 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PER3P56645 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PER3P56645 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
PER3P56645 MIR340-201ENST00000362125 95 ntBASIC2.69□□□□□ -1.98
PER3P56645 Y_RNA.274-201ENST00000364714 101 ntBASIC2.69□□□□□ -1.98
PER3P56645 RNU6-200P-201ENST00000364743 107 ntBASIC2.69□□□□□ -1.98
PER3P56645 RNU6-514P-201ENST00000384208 107 ntBASIC2.69□□□□□ -1.98
PER3P56645 RNU6-1289P-201ENST00000384431 106 ntBASIC2.69□□□□□ -1.98
PER3P56645 MIR196B-201ENST00000384852 84 ntBASIC2.69□□□□□ -1.98
PER3P56645 MIR1261-201ENST00000408659 82 ntBASIC2.69□□□□□ -1.98
PER3P56645 AL135790.2-201ENST00000437701 267 ntBASIC2.69□□□□□ -1.98
PER3P56645 AC093259.1-201ENST00000509755 300 ntBASIC2.69□□□□□ -1.98
PER3P56645 RNA5SP490-201ENST00000517141 136 ntBASIC2.69□□□□□ -1.98
PER3P56645 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.69□□□□□ -1.98
PER3P56645 AC090115.4-201ENST00000609970 188 ntBASIC2.69□□□□□ -1.98
PER3P56645 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms