Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AC104332.2-201ENST00000429959 156 ntBASIC2.44□□□□□ -2.02
TTC3P53804 RPL39P29-201ENST00000447779 157 ntBASIC2.44□□□□□ -2.02
TTC3P53804 RNU6-625P-201ENST00000459412 107 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AC107393.1-201ENST00000512403 346 ntBASIC2.44□□□□□ -2.02
TTC3P53804 RNU2-31P-201ENST00000516954 155 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AP005660.1-201ENST00000522972 293 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AC073308.1-201ENST00000623696 305 ntBASIC2.44□□□□□ -2.02
TTC3P53804 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC3P53804 AC135776.4-201ENST00000624300 1904 ntBASIC2.44□□□□□ -2.02
TTC3P53804 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC3P53804 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.44□□□□□ -2.02
TTC3P53804 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC3P53804 RNU6-1140P-201ENST00000410517 106 ntBASIC2.44□□□□□ -2.02
TTC3P53804 RNA5SP475-201ENST00000410568 110 ntBASIC2.44□□□□□ -2.02
TTC3P53804 RAB28P5-201ENST00000427490 651 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AL603825.1-201ENST00000438481 80 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.44□□□□□ -2.02
TTC3P53804 AL714022.1-201ENST00000439897 151 ntBASIC2.44□□□□□ -2.02
TTC3P53804 SNORD2.1-201ENST00000458762 69 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AC108210.2-201ENST00000503681 201 ntBASIC2.44□□□□□ -2.02
TTC3P53804 AC006199.1-201ENST00000548728 219 ntBASIC2.44□□□□□ -2.02
TTC3P53804 MIR5006-201ENST00000583027 110 ntBASIC2.44□□□□□ -2.02
TTC3P53804 U2.14-201ENST00000615943 113 ntBASIC2.44□□□□□ -2.02
TTC3P53804 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.44□□□□□ -2.02
TTC3P53804 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.44□□□□□ -2.02
TTC3P53804 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC3P53804 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.43□□□□□ -2.02
TTC3P53804 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC3P53804 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC3P53804 SNORD114-19-201ENST00000363072 75 ntBASIC2.43□□□□□ -2.02
TTC3P53804 RNU6-801P-201ENST00000364087 105 ntBASIC2.43□□□□□ -2.02
TTC3P53804 RNU6-454P-201ENST00000364292 107 ntBASIC2.43□□□□□ -2.02
TTC3P53804 RNU6-879P-201ENST00000364328 108 ntBASIC2.43□□□□□ -2.02
TTC3P53804 Y_RNA.270-201ENST00000364693 104 ntBASIC2.43□□□□□ -2.02
TTC3P53804 Y_RNA.793-201ENST00000411222 111 ntBASIC2.43□□□□□ -2.02
TTC3P53804 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
TTC3P53804 RNU6-436P-201ENST00000516171 114 ntBASIC2.43□□□□□ -2.02
TTC3P53804 RNU6-861P-201ENST00000516745 106 ntBASIC2.43□□□□□ -2.02
TTC3P53804 AC115990.1-201ENST00000526957 301 ntBASIC2.43□□□□□ -2.02
TTC3P53804 MIR4282-201ENST00000583613 67 ntBASIC2.43□□□□□ -2.02
TTC3P53804 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.43□□□□□ -2.02
TTC3P53804 AL359854.1-201ENST00000614203 1594 ntBASIC2.43□□□□□ -2.02
TTC3P53804 MTND5P35-201ENST00000557537 1720 ntBASIC2.42□□□□□ -2.02
TTC3P53804 Y_RNA.170-201ENST00000363746 110 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
TTC3P53804 PCNPP3-201ENST00000393579 471 ntBASIC2.42□□□□□ -2.02
TTC3P53804 Y_RNA.626-201ENST00000411288 95 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AC096649.2-201ENST00000416186 393 ntBASIC2.42□□□□□ -2.02
TTC3P53804 NDUFB4P10-201ENST00000452541 359 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RPL23AP3-201ENST00000453844 468 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AC107626.1-201ENST00000471084 183 ntBASIC2.42□□□□□ -2.02
TTC3P53804 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.42□□□□□ -2.02
TTC3P53804 AC005176.2-201ENST00000596933 147 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AC110079.1-202ENST00000635213 138 ntBASIC2.42□□□□□ -2.02
TTC3P53804 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.42□□□□□ -2.02
TTC3P53804 snoU2_19.1-201ENST00000362361 80 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNU6-682P-201ENST00000363843 106 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNY4P28-201ENST00000365281 93 ntBASIC2.42□□□□□ -2.02
TTC3P53804 U8.9-201ENST00000365667 134 ntBASIC2.42□□□□□ -2.02
TTC3P53804 Y_RNA.555-201ENST00000384673 110 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNA5SP252-201ENST00000391131 119 ntBASIC2.42□□□□□ -2.02
TTC3P53804 MIR320B2-201ENST00000408479 138 ntBASIC2.42□□□□□ -2.02
TTC3P53804 MICF-203ENST00000432679 129 ntBASIC2.42□□□□□ -2.02
TTC3P53804 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.42□□□□□ -2.02
TTC3P53804 AC005002.2-201ENST00000438228 269 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AL138752.1-201ENST00000452964 351 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNU7-120P-201ENST00000459334 63 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNU6-406P-201ENST00000516470 107 ntBASIC2.42□□□□□ -2.02
TTC3P53804 RNU6-711P-201ENST00000517255 106 ntBASIC2.42□□□□□ -2.02
TTC3P53804 MIR3609-201ENST00000582661 80 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.42□□□□□ -2.02
TTC3P53804 AC023043.3-201ENST00000593113 385 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AL391813.1-201ENST00000603098 260 ntBASIC2.42□□□□□ -2.02
TTC3P53804 AC011921.3-201ENST00000605540 361 ntBASIC2.42□□□□□ -2.02
TTC3P53804 Y_RNA.180-201ENST00000363867 113 ntBASIC2.41□□□□□ -2.02
TTC3P53804 Y_RNA.199-201ENST00000364014 102 ntBASIC2.41□□□□□ -2.02
TTC3P53804 Y_RNA.418-201ENST00000384029 102 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RNU1-57P-201ENST00000384491 166 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AC023141.4-201ENST00000412031 328 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AL365496.1-201ENST00000426885 215 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.41□□□□□ -2.02
TTC3P53804 Y_RNA.662-201ENST00000516028 97 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RNU6-344P-201ENST00000516635 111 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
TTC3P53804 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TTC3P53804 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
TTC3P53804 RNU6-1010P-201ENST00000362757 107 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RNA5SP139-201ENST00000364340 117 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RN7SKP51-201ENST00000410781 304 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RNU6-1135P-201ENST00000411083 103 ntBASIC2.41□□□□□ -2.02
TTC3P53804 RNU6-1199P-201ENST00000411249 104 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.41□□□□□ -2.02
TTC3P53804 Y_RNA.679-201ENST00000516416 91 ntBASIC2.41□□□□□ -2.02
TTC3P53804 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.41□□□□□ -2.02
TTC3P53804 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.41□□□□□ -2.02
TTC3P53804 AC006001.4-201ENST00000622243 395 ntBASIC2.41□□□□□ -2.02
TTC3P53804 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.4□□□□□ -2.02
TTC3P53804 RNU1-105P-201ENST00000363470 161 ntBASIC2.4□□□□□ -2.03
TTC3P53804 SNORA19-201ENST00000384737 128 ntBASIC2.4□□□□□ -2.03
TTC3P53804 U8.13-201ENST00000390842 128 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms