Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.498-201ENST00000384460 102 ntBASIC2.54□□□□□ -2
COPB1P53618 AL033519.2-201ENST00000403958 392 ntBASIC2.54□□□□□ -2
COPB1P53618 RNU4-30P-201ENST00000410245 143 ntBASIC2.54□□□□□ -2
COPB1P53618 RAB28P5-201ENST00000427490 651 ntBASIC2.54□□□□□ -2
COPB1P53618 RPS15AP28-201ENST00000435088 386 ntBASIC2.54□□□□□ -2
COPB1P53618 RPL39P38-201ENST00000467018 153 ntBASIC2.54□□□□□ -2
COPB1P53618 SEPT14P8-201ENST00000508026 178 ntBASIC2.54□□□□□ -2
COPB1P53618 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
COPB1P53618 RNU6-966P-201ENST00000516479 104 ntBASIC2.54□□□□□ -2
COPB1P53618 DEFB108E-201ENST00000524692 240 ntBASIC2.54□□□□□ -2
COPB1P53618 AC018630.3-201ENST00000542637 96 ntBASIC2.54□□□□□ -2
COPB1P53618 AC005176.2-201ENST00000596933 147 ntBASIC2.54□□□□□ -2
COPB1P53618 AC022441.3-201ENST00000605737 136 ntBASIC2.54□□□□□ -2
COPB1P53618 AC011373.1-201ENST00000607270 237 ntBASIC2.54□□□□□ -2
COPB1P53618 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.54□□□□□ -2
COPB1P53618 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.54□□□□□ -2
COPB1P53618 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
COPB1P53618 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
COPB1P53618 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.54□□□□□ -2
COPB1P53618 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COPB1P53618 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.53□□□□□ -2
COPB1P53618 AL391987.6-201ENST00000305671 199 ntBASIC2.53□□□□□ -2
COPB1P53618 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.53□□□□□ -2
COPB1P53618 Y_RNA.101-201ENST00000363154 102 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU6-1175P-201ENST00000365200 107 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU6-290P-201ENST00000365212 101 ntBASIC2.53□□□□□ -2
COPB1P53618 Y_RNA.489-201ENST00000384410 101 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU6-1199P-201ENST00000411249 104 ntBASIC2.53□□□□□ -2
COPB1P53618 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
COPB1P53618 AL390729.2-201ENST00000416137 156 ntBASIC2.53□□□□□ -2
COPB1P53618 HMGB3P17-201ENST00000504195 649 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU6-1023P-201ENST00000516137 106 ntBASIC2.53□□□□□ -2
COPB1P53618 RNA5SP24-201ENST00000516478 95 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU6-1098P-201ENST00000516772 96 ntBASIC2.53□□□□□ -2
COPB1P53618 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
COPB1P53618 AC021269.2-201ENST00000532318 330 ntBASIC2.53□□□□□ -2
COPB1P53618 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
COPB1P53618 SNORD11B-201ENST00000607707 90 ntBASIC2.53□□□□□ -2
COPB1P53618 AC069294.1-201ENST00000608397 350 ntBASIC2.53□□□□□ -2
COPB1P53618 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
COPB1P53618 AC090425.1-201ENST00000610007 140 ntBASIC2.53□□□□□ -2
COPB1P53618 AC064859.1-201ENST00000624741 174 ntBASIC2.53□□□□□ -2
COPB1P53618 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.53□□□□□ -2
COPB1P53618 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.53□□□□□ -2
COPB1P53618 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2.01
COPB1P53618 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
COPB1P53618 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
COPB1P53618 RNU4-90P-201ENST00000362773 141 ntBASIC2.52□□□□□ -2.01
COPB1P53618 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
COPB1P53618 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
COPB1P53618 MIR95-201ENST00000385072 81 ntBASIC2.52□□□□□ -2.01
COPB1P53618 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COPB1P53618 RNU6-907P-201ENST00000390924 102 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.52□□□□□ -2.01
COPB1P53618 Z82209.1-201ENST00000422141 2135 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
COPB1P53618 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.52□□□□□ -2.01
COPB1P53618 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
COPB1P53618 MTND4LP30-201ENST00000454092 297 ntBASIC2.52□□□□□ -2.01
COPB1P53618 RNU7-110P-201ENST00000516891 62 ntBASIC2.52□□□□□ -2.01
COPB1P53618 RNU6-586P-201ENST00000517265 104 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.52□□□□□ -2.01
COPB1P53618 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.52□□□□□ -2.01
COPB1P53618 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.52□□□□□ -2.01
COPB1P53618 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AC005357.1-201ENST00000588399 301 ntBASIC2.52□□□□□ -2.01
COPB1P53618 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AC004467.1-201ENST00000615678 330 ntBASIC2.52□□□□□ -2.01
COPB1P53618 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
COPB1P53618 AC008873.1-201ENST00000625051 138 ntBASIC2.52□□□□□ -2.01
COPB1P53618 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COPB1P53618 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COPB1P53618 Y_RNA.60-201ENST00000362831 98 ntBASIC2.51□□□□□ -2.01
COPB1P53618 U8.2-201ENST00000363156 134 ntBASIC2.51□□□□□ -2.01
COPB1P53618 Y_RNA.446-201ENST00000384178 104 ntBASIC2.51□□□□□ -2.01
COPB1P53618 Y_RNA.477-201ENST00000384352 108 ntBASIC2.51□□□□□ -2.01
COPB1P53618 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.51□□□□□ -2.01
COPB1P53618 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.51□□□□□ -2.01
COPB1P53618 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.51□□□□□ -2.01
COPB1P53618 AC234781.5-201ENST00000508429 271 ntBASIC2.51□□□□□ -2.01
COPB1P53618 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
COPB1P53618 MIR449C-201ENST00000516047 92 ntBASIC2.51□□□□□ -2.01
COPB1P53618 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
COPB1P53618 RNU6-388P-201ENST00000517012 105 ntBASIC2.51□□□□□ -2.01
COPB1P53618 RNU6-389P-201ENST00000517048 105 ntBASIC2.51□□□□□ -2.01
COPB1P53618 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
COPB1P53618 AC010900.2-201ENST00000604508 210 ntBASIC2.51□□□□□ -2.01
COPB1P53618 AL590240.4-201ENST00000616908 390 ntBASIC2.51□□□□□ -2.01
COPB1P53618 MIR3674-201ENST00000636576 68 ntBASIC2.51□□□□□ -2.01
COPB1P53618 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COPB1P53618 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.5□□□□□ -2.01
COPB1P53618 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COPB1P53618 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COPB1P53618 Y_RNA.20-201ENST00000362479 113 ntBASIC2.5□□□□□ -2.01
COPB1P53618 RNU6-461P-201ENST00000364195 107 ntBASIC2.5□□□□□ -2.01
COPB1P53618 RNU6-1264P-201ENST00000383891 107 ntBASIC2.5□□□□□ -2.01
COPB1P53618 Y_RNA.416-201ENST00000384014 113 ntBASIC2.5□□□□□ -2.01
COPB1P53618 Y_RNA.478-201ENST00000384358 107 ntBASIC2.5□□□□□ -2.01
COPB1P53618 SNORD58.1-201ENST00000391313 66 ntBASIC2.5□□□□□ -2.01
COPB1P53618 MIR1294-201ENST00000408503 142 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms