Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 Y_RNA.577-201ENST00000384794 101 ntBASIC1.92□□□□□ -2.1
LBX1P52954 MIR549A-201ENST00000385268 96 ntBASIC1.92□□□□□ -2.1
LBX1P52954 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
LBX1P52954 MIR190B-201ENST00000401119 79 ntBASIC1.92□□□□□ -2.1
LBX1P52954 EIF1P2-201ENST00000428233 350 ntBASIC1.92□□□□□ -2.1
LBX1P52954 Y_RNA.639-201ENST00000458981 102 ntBASIC1.92□□□□□ -2.1
LBX1P52954 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
LBX1P52954 RNU7-175P-201ENST00000515915 61 ntBASIC1.92□□□□□ -2.1
LBX1P52954 RNU6-470P-201ENST00000515954 104 ntBASIC1.92□□□□□ -2.1
LBX1P52954 RNU6-1114P-201ENST00000516022 107 ntBASIC1.92□□□□□ -2.1
LBX1P52954 RNU6-344P-201ENST00000516635 111 ntBASIC1.92□□□□□ -2.1
LBX1P52954 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
LBX1P52954 AC004584.2-201ENST00000570407 410 ntBASIC1.92□□□□□ -2.1
LBX1P52954 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.92□□□□□ -2.1
LBX1P52954 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LBX1P52954 AC125232.2-201ENST00000592457 143 ntBASIC1.92□□□□□ -2.1
LBX1P52954 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
LBX1P52954 AC087588.2-201ENST00000617667 426 ntBASIC1.92□□□□□ -2.1
LBX1P52954 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
LBX1P52954 AC138305.3-201ENST00000624988 240 ntBASIC1.92□□□□□ -2.1
LBX1P52954 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
LBX1P52954 RNU6-222P-201ENST00000362438 107 ntBASIC1.91□□□□□ -2.1
LBX1P52954 Y_RNA.99-201ENST00000363138 105 ntBASIC1.91□□□□□ -2.1
LBX1P52954 Y_RNA.187-201ENST00000363918 113 ntBASIC1.91□□□□□ -2.1
LBX1P52954 RNU6-1164P-201ENST00000364428 107 ntBASIC1.91□□□□□ -2.1
LBX1P52954 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
LBX1P52954 SNORD31B-201ENST00000364977 69 ntBASIC1.91□□□□□ -2.1
LBX1P52954 Y_RNA.463-201ENST00000384271 102 ntBASIC1.91□□□□□ -2.1
LBX1P52954 Y_RNA.496-201ENST00000384444 101 ntBASIC1.91□□□□□ -2.1
LBX1P52954 HMGN2P39-201ENST00000398005 273 ntBASIC1.91□□□□□ -2.1
LBX1P52954 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
LBX1P52954 MTCO2P27-201ENST00000420740 428 ntBASIC1.91□□□□□ -2.1
LBX1P52954 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
LBX1P52954 AC022493.2-201ENST00000506122 481 ntBASIC1.91□□□□□ -2.1
LBX1P52954 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.91□□□□□ -2.1
LBX1P52954 UBL5P4-201ENST00000562584 236 ntBASIC1.91□□□□□ -2.1
LBX1P52954 7SK.7-201ENST00000603504 247 ntBASIC1.91□□□□□ -2.1
LBX1P52954 AC126177.8-201ENST00000618339 1015 ntBASIC1.91□□□□□ -2.1
LBX1P52954 MIR6788-201ENST00000618842 66 ntBASIC1.91□□□□□ -2.1
LBX1P52954 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LBX1P52954 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LBX1P52954 ICE2P2-201ENST00000483823 2787 ntBASIC1.9□□□□□ -2.1
LBX1P52954 MTND5P10-201ENST00000603719 1809 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RNU6-797P-201ENST00000363101 109 ntBASIC1.9□□□□□ -2.11
LBX1P52954 Y_RNA.106-201ENST00000363189 100 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RNU6-873P-201ENST00000363833 107 ntBASIC1.9□□□□□ -2.11
LBX1P52954 Y_RNA.251-201ENST00000364551 99 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
LBX1P52954 Y_RNA.364-201ENST00000365532 101 ntBASIC1.9□□□□□ -2.11
LBX1P52954 SNORD14D-201ENST00000384390 87 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RNY1P4-201ENST00000384595 115 ntBASIC1.9□□□□□ -2.11
LBX1P52954 MIR548J-201ENST00000408833 112 ntBASIC1.9□□□□□ -2.11
LBX1P52954 MRPS18CP6-201ENST00000423587 223 ntBASIC1.9□□□□□ -2.11
LBX1P52954 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.9□□□□□ -2.11
LBX1P52954 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
LBX1P52954 RPL30P15-201ENST00000457129 321 ntBASIC1.9□□□□□ -2.11
LBX1P52954 U8.22-201ENST00000459141 133 ntBASIC1.9□□□□□ -2.11
LBX1P52954 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.9□□□□□ -2.11
LBX1P52954 AC093303.1-201ENST00000514549 295 ntBASIC1.9□□□□□ -2.11
LBX1P52954 CBX3P4-201ENST00000538909 354 ntBASIC1.9□□□□□ -2.11
LBX1P52954 AK6P2-201ENST00000549020 471 ntBASIC1.9□□□□□ -2.11
LBX1P52954 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.9□□□□□ -2.11
LBX1P52954 AC090617.3-201ENST00000573670 475 ntBASIC1.9□□□□□ -2.11
LBX1P52954 AC133104.2-201ENST00000615272 193 ntBASIC1.9□□□□□ -2.11
LBX1P52954 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LBX1P52954 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LBX1P52954 Y_RNA.5-201ENST00000362334 102 ntBASIC1.89□□□□□ -2.11
LBX1P52954 RNU6-99P-201ENST00000364721 107 ntBASIC1.89□□□□□ -2.11
LBX1P52954 AL357139.1-201ENST00000407792 426 ntBASIC1.89□□□□□ -2.11
LBX1P52954 AC018865.2-201ENST00000423631 129 ntBASIC1.89□□□□□ -2.11
LBX1P52954 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.89□□□□□ -2.11
LBX1P52954 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
LBX1P52954 MTCO1P44-201ENST00000441935 243 ntBASIC1.89□□□□□ -2.11
LBX1P52954 HMGN2P9-201ENST00000476875 229 ntBASIC1.89□□□□□ -2.11
LBX1P52954 RNU6-1198P-201ENST00000516904 67 ntBASIC1.89□□□□□ -2.11
LBX1P52954 Y_RNA.706-201ENST00000516933 99 ntBASIC1.89□□□□□ -2.11
LBX1P52954 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.89□□□□□ -2.11
LBX1P52954 AL031274.2-201ENST00000599419 203 ntBASIC1.89□□□□□ -2.11
LBX1P52954 MIR6078-201ENST00000611069 100 ntBASIC1.89□□□□□ -2.11
LBX1P52954 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
LBX1P52954 ZNF204P-201ENST00000416749 2397 ntBASIC1.89□□□□□ -2.11
LBX1P52954 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.89□□□□□ -2.11
LBX1P52954 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
LBX1P52954 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LBX1P52954 RNU1-62P-201ENST00000362599 164 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RNU6-490P-201ENST00000362985 107 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RNU6-743P-201ENST00000364151 106 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RNU4-41P-201ENST00000364426 143 ntBASIC1.88□□□□□ -2.11
LBX1P52954 Y_RNA.252-201ENST00000364556 101 ntBASIC1.88□□□□□ -2.11
LBX1P52954 Y_RNA.394-201ENST00000383942 103 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RNU6-281P-201ENST00000384212 103 ntBASIC1.88□□□□□ -2.11
LBX1P52954 MIR586-201ENST00000385035 97 ntBASIC1.88□□□□□ -2.11
LBX1P52954 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms