Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
PDX1P52945 AC114482.1-201ENST00000418010 247 ntBASIC1.88□□□□□ -2.11
PDX1P52945 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.88□□□□□ -2.11
PDX1P52945 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.88□□□□□ -2.11
PDX1P52945 AL137792.2-201ENST00000443484 235 ntBASIC1.88□□□□□ -2.11
PDX1P52945 AL357134.1-201ENST00000445848 426 ntBASIC1.88□□□□□ -2.11
PDX1P52945 RNU6-976P-201ENST00000516086 111 ntBASIC1.88□□□□□ -2.11
PDX1P52945 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
PDX1P52945 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
PDX1P52945 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.88□□□□□ -2.11
PDX1P52945 AC130454.1-201ENST00000622948 401 ntBASIC1.88□□□□□ -2.11
PDX1P52945 AC090574.1-201ENST00000623186 233 ntBASIC1.88□□□□□ -2.11
PDX1P52945 MIR4272-201ENST00000635924 64 ntBASIC1.88□□□□□ -2.11
PDX1P52945 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.4-201ENST00000362333 112 ntBASIC1.87□□□□□ -2.11
PDX1P52945 Y_RNA.31-201ENST00000362574 102 ntBASIC1.87□□□□□ -2.11
PDX1P52945 Y_RNA.132-201ENST00000363421 102 ntBASIC1.87□□□□□ -2.11
PDX1P52945 Y_RNA.238-201ENST00000364441 102 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RNA5SP138-201ENST00000365098 114 ntBASIC1.87□□□□□ -2.11
PDX1P52945 Y_RNA.395-201ENST00000383945 109 ntBASIC1.87□□□□□ -2.11
PDX1P52945 Y_RNA.431-201ENST00000384086 102 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RNU6-708P-201ENST00000384217 107 ntBASIC1.87□□□□□ -2.11
PDX1P52945 MIR548B-201ENST00000385247 97 ntBASIC1.87□□□□□ -2.11
PDX1P52945 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
PDX1P52945 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RNU6-57P-201ENST00000411348 103 ntBASIC1.87□□□□□ -2.11
PDX1P52945 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDX1P52945 AC018865.2-201ENST00000423631 129 ntBASIC1.87□□□□□ -2.11
PDX1P52945 MTND4P28-201ENST00000426217 387 ntBASIC1.87□□□□□ -2.11
PDX1P52945 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.87□□□□□ -2.11
PDX1P52945 IPO7P1-201ENST00000442031 636 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RNU6-1170P-201ENST00000515974 106 ntBASIC1.87□□□□□ -2.11
PDX1P52945 RNU6-856P-201ENST00000516959 98 ntBASIC1.87□□□□□ -2.11
PDX1P52945 SNORD116.3-201ENST00000517176 78 ntBASIC1.87□□□□□ -2.11
PDX1P52945 AC091144.1-201ENST00000519573 138 ntBASIC1.87□□□□□ -2.11
PDX1P52945 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.87□□□□□ -2.11
PDX1P52945 AC007485.1-201ENST00000616755 206 ntBASIC1.87□□□□□ -2.11
PDX1P52945 U2.1-201ENST00000618978 145 ntBASIC1.87□□□□□ -2.11
PDX1P52945 AC090971.5-201ENST00000621102 293 ntBASIC1.87□□□□□ -2.11
PDX1P52945 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
PDX1P52945 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
PDX1P52945 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PDX1P52945 AC009487.4-201ENST00000624969 3585 ntBASIC1.86□□□□□ -2.11
PDX1P52945 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU6-1145P-201ENST00000384246 107 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNY1P14-201ENST00000384426 108 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
PDX1P52945 Y_RNA.605-201ENST00000410577 105 ntBASIC1.86□□□□□ -2.11
PDX1P52945 AC016909.1-201ENST00000415916 166 ntBASIC1.86□□□□□ -2.11
PDX1P52945 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
PDX1P52945 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
PDX1P52945 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.86□□□□□ -2.11
PDX1P52945 RNU1-131P-201ENST00000458943 161 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU7-57P-201ENST00000459540 60 ntBASIC1.86□□□□□ -2.11
PDX1P52945 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.86□□□□□ -2.11
PDX1P52945 AC067942.3-201ENST00000512025 362 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RN7SKP49-201ENST00000516675 260 ntBASIC1.86□□□□□ -2.11
PDX1P52945 RNU4-77P-201ENST00000516692 156 ntBASIC1.86□□□□□ -2.11
PDX1P52945 AC006600.1-201ENST00000572529 153 ntBASIC1.86□□□□□ -2.11
PDX1P52945 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.86□□□□□ -2.11
PDX1P52945 AC092447.9-201ENST00000603395 144 ntBASIC1.86□□□□□ -2.11
PDX1P52945 SNORD58B-201ENST00000607313 66 ntBASIC1.86□□□□□ -2.11
PDX1P52945 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PDX1P52945 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PDX1P52945 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
PDX1P52945 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
PDX1P52945 RNU6-474P-201ENST00000384243 107 ntBASIC1.85□□□□□ -2.11
PDX1P52945 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
PDX1P52945 Y_RNA.595-201ENST00000410403 105 ntBASIC1.85□□□□□ -2.11
PDX1P52945 ELOCP21-201ENST00000412558 336 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AC060773.1-201ENST00000421698 310 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
PDX1P52945 UBE2V1P7-201ENST00000446395 340 ntBASIC1.85□□□□□ -2.11
PDX1P52945 UQCRBP2-201ENST00000447827 297 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 AC114982.1-201ENST00000469402 321 ntBASIC1.85□□□□□ -2.11
PDX1P52945 RPS27P21-201ENST00000486977 252 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AC144568.1-201ENST00000520139 137 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AP002001.1-203ENST00000534002 267 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
PDX1P52945 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
PDX1P52945 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
PDX1P52945 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.85□□□□□ -2.11
PDX1P52945 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.85□□□□□ -2.11
PDX1P52945 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.85□□□□□ -2.11
PDX1P52945 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
PDX1P52945 AL159152.1-201ENST00000635019 2587 ntBASIC1.84□□□□□ -2.11
PDX1P52945 MTND4P1-201ENST00000457501 1466 ntBASIC1.84□□□□□ -2.11
PDX1P52945 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PDX1P52945 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
PDX1P52945 Y_RNA.80-201ENST00000362996 102 ntBASIC1.84□□□□□ -2.11
PDX1P52945 Y_RNA.445-201ENST00000384168 102 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms