Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
NPTX2P47972 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.71□□□□□ -1.98
NPTX2P47972 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.71□□□□□ -1.98
NPTX2P47972 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.71□□□□□ -1.98
NPTX2P47972 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.71□□□□□ -1.98
NPTX2P47972 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.71□□□□□ -1.98
NPTX2P47972 AC008749.1-201ENST00000597650 306 ntBASIC2.71□□□□□ -1.98
NPTX2P47972 AL713866.2-201ENST00000603579 219 ntBASIC2.71□□□□□ -1.98
NPTX2P47972 AC091932.3-201ENST00000624223 323 ntBASIC2.71□□□□□ -1.98
NPTX2P47972 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPTX2P47972 Y_RNA.277-201ENST00000364754 102 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 RNU6-338P-201ENST00000383888 105 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 Y_RNA.515-201ENST00000384535 112 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 RNU6-1274P-201ENST00000384557 107 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPTX2P47972 AL139095.1-201ENST00000404326 391 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 RPL23AP36-201ENST00000413895 458 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AL139109.1-201ENST00000455491 297 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 CKS1BP2-201ENST00000497342 240 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 RNU2-31P-201ENST00000516954 155 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 RNU1-117P-201ENST00000517041 158 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AL442067.1-201ENST00000613261 223 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AC004467.1-201ENST00000615678 330 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AC006001.4-201ENST00000622243 395 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 AC068205.3-201ENST00000636385 468 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 MIR3674-201ENST00000636576 68 ntBASIC2.7□□□□□ -1.98
NPTX2P47972 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPTX2P47972 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPTX2P47972 RNU4-82P-201ENST00000362443 140 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 RNU6-944P-201ENST00000364023 107 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 SNORD58.1-201ENST00000391313 66 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
NPTX2P47972 Z98949.2-201ENST00000440996 144 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 AC005042.3-201ENST00000453230 174 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 MIR4643-201ENST00000577473 78 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.69□□□□□ -1.98
NPTX2P47972 AL109918.3-201ENST00000603072 338 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 BX284668.6-201ENST00000606899 438 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
NPTX2P47972 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.69□□□□□ -1.98
NPTX2P47972 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NPTX2P47972 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NPTX2P47972 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPTX2P47972 MIR410-201ENST00000362222 80 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 Y_RNA.65-201ENST00000362846 100 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 Y_RNA.383-201ENST00000383855 97 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU6-1264P-201ENST00000383891 107 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 Y_RNA.418-201ENST00000384029 102 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU6-1310P-201ENST00000384153 107 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 SNORA67.2-201ENST00000384300 149 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU2-14P-201ENST00000411053 191 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU6-1199P-201ENST00000411249 104 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 POLR2KP2-201ENST00000438155 177 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 AL161788.1-201ENST00000441805 169 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 MRPS10P1-201ENST00000448483 130 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 AC090515.1-201ENST00000465295 476 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU6-107P-201ENST00000516643 102 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RNU6-1098P-201ENST00000516772 96 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.68□□□□□ -1.98
NPTX2P47972 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.68□□□□□ -1.98
NPTX2P47972 MIR5194-201ENST00000582634 120 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 AC037487.3-201ENST00000606668 112 ntBASIC2.68□□□□□ -1.98
NPTX2P47972 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NPTX2P47972 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.68□□□□□ -1.98
NPTX2P47972 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.68□□□□□ -1.98
NPTX2P47972 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPTX2P47972 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPTX2P47972 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
NPTX2P47972 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPTX2P47972 Y_RNA.44-201ENST00000362676 108 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 RNA5SP393-201ENST00000363423 117 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 MIR95-201ENST00000385072 81 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.67□□□□□ -1.98
NPTX2P47972 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
NPTX2P47972 MIR449C-201ENST00000516047 92 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.67□□□□□ -1.98
NPTX2P47972 AC009779.6-201ENST00000603972 165 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 AL355297.2-201ENST00000604792 129 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.67□□□□□ -1.98
NPTX2P47972 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 AC008873.1-201ENST00000625051 138 ntBASIC2.67□□□□□ -1.98
NPTX2P47972 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
NPTX2P47972 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.67□□□□□ -1.98
NPTX2P47972 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPTX2P47972 SNORA25.1-201ENST00000362326 128 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 Y_RNA.136-201ENST00000363444 102 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 RNU6-454P-201ENST00000364292 107 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 Y_RNA.269-201ENST00000364685 89 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 RNU2-54P-201ENST00000410299 190 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 RNA5SP475-201ENST00000410568 110 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 MTCO1P5-201ENST00000433573 344 ntBASIC2.66□□□□□ -1.98
NPTX2P47972 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.66□□□□□ -1.98
NPTX2P47972 RPL23AP94-201ENST00000512518 302 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms