Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 U3.8-201ENST00000363675 217 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-438P-201ENST00000365561 103 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-1040P-201ENST00000383974 107 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 Y_RNA.557-201ENST00000384680 107 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HMGCLP35914 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCLP35914 USP9YP16-201ENST00000430287 407 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGCLP35914 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCLP35914 USP9YP23-201ENST00000455085 407 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 U8.22-201ENST00000459141 133 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-221P-201ENST00000459541 99 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-120P-201ENST00000516077 103 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-948P-201ENST00000516374 107 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCLP35914 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGCLP35914 AC015712.3-201ENST00000559380 164 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 SUB1P4-201ENST00000566062 339 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HMGCLP35914 AC010900.2-201ENST00000604508 210 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCLP35914 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGCLP35914 AC126177.8-201ENST00000618339 1015 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-490P-201ENST00000362985 107 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 RNU6-99P-201ENST00000364721 107 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 RNU6-318P-201ENST00000384283 103 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 RNU6-1026P-201ENST00000384465 108 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 MIR597-201ENST00000384968 97 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 RNA5SP501-201ENST00000410990 112 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 AC009310.1-201ENST00000414414 451 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 AC007098.1-201ENST00000420122 367 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCLP35914 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCLP35914 AC022493.2-201ENST00000506122 481 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.55□□□□□ -2.16
HMGCLP35914 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 SUMO2P18-201ENST00000518873 252 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 CYCSP23-201ENST00000519781 313 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGCLP35914 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCLP35914 MZT1P2-201ENST00000604387 248 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 AC010999.1-201ENST00000611856 324 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 MIR6715A-201ENST00000615929 79 ntBASIC1.55□□□□□ -2.16
HMGCLP35914 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGCLP35914 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGCLP35914 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU6-23P-201ENST00000363283 107 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 Y_RNA.179-201ENST00000363844 90 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 Y_RNA.259-201ENST00000364619 101 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU6-867P-201ENST00000364956 107 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 Y_RNA.463-201ENST00000384271 102 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU6-541P-201ENST00000384709 110 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MIR548B-201ENST00000385247 97 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MIR1185-2-201ENST00000408687 86 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU6-1156P-201ENST00000410365 100 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 Y_RNA.604-201ENST00000410574 102 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 ELOCP21-201ENST00000412558 336 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC016909.1-201ENST00000415916 166 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MTCO2P27-201ENST00000420740 428 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC099677.2-201ENST00000436385 175 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC114982.1-201ENST00000469402 321 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC108210.2-201ENST00000503681 201 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RNU6-911P-201ENST00000516523 104 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 RN7SKP49-201ENST00000516675 260 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MIR4753-201ENST00000585119 83 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC104984.5-201ENST00000586878 94 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGCLP35914 AC133104.2-201ENST00000615272 193 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 AC084781.2-201ENST00000615568 161 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGCLP35914 AC073544.1-201ENST00000600110 1595 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
HMGCLP35914 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
HMGCLP35914 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCLP35914 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.132-201ENST00000363421 102 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.356-201ENST00000365475 113 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.395-201ENST00000383945 109 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 RNU6-418P-201ENST00000384035 107 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.592-201ENST00000410274 109 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 RNU6-1304P-201ENST00000411374 106 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AC018865.2-201ENST00000423631 129 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 UBE2V1P7-201ENST00000446395 340 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGCLP35914 RPL30P15-201ENST00000457129 321 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AC074133.1-201ENST00000515696 183 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 RNVU1-2-201ENST00000516326 135 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 Y_RNA.683-201ENST00000516508 93 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
HMGCLP35914 AC093023.1-201ENST00000547375 507 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 MTND5P35-201ENST00000557537 1720 ntBASIC1.53□□□□□ -2.16
HMGCLP35914 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms