Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 Y_RNA.700-201ENST00000516806 100 ntBASIC2.45□□□□□ -2.02
THBS4P35443 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.45□□□□□ -2.02
THBS4P35443 AL162424.1-201ENST00000602325 221 ntBASIC2.45□□□□□ -2.02
THBS4P35443 AC068205.3-201ENST00000636385 468 ntBASIC2.45□□□□□ -2.02
THBS4P35443 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.45□□□□□ -2.02
THBS4P35443 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
THBS4P35443 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
THBS4P35443 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
THBS4P35443 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
THBS4P35443 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
THBS4P35443 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
THBS4P35443 Y_RNA.111-201ENST00000363248 100 ntBASIC2.44□□□□□ -2.02
THBS4P35443 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
THBS4P35443 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
THBS4P35443 Y_RNA.590-201ENST00000410140 107 ntBASIC2.44□□□□□ -2.02
THBS4P35443 ELOCP21-201ENST00000412558 336 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.44□□□□□ -2.02
THBS4P35443 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.44□□□□□ -2.02
THBS4P35443 AC087499.2-201ENST00000432861 149 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.44□□□□□ -2.02
THBS4P35443 AC091959.1-201ENST00000495857 238 ntBASIC2.44□□□□□ -2.02
THBS4P35443 Y_RNA.679-201ENST00000516416 91 ntBASIC2.44□□□□□ -2.02
THBS4P35443 RNA5SP490-201ENST00000517141 136 ntBASIC2.44□□□□□ -2.02
THBS4P35443 GTF3AP2-201ENST00000557014 266 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AC130289.1-201ENST00000577321 73 ntBASIC2.44□□□□□ -2.02
THBS4P35443 ELOCP29-201ENST00000588193 334 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AL512605.2-201ENST00000592972 256 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AL109918.3-201ENST00000603072 338 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
THBS4P35443 AC004467.1-201ENST00000615678 330 ntBASIC2.44□□□□□ -2.02
THBS4P35443 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
THBS4P35443 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
THBS4P35443 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
THBS4P35443 RNU6-743P-201ENST00000364151 106 ntBASIC2.43□□□□□ -2.02
THBS4P35443 RNY1-201ENST00000364228 113 ntBASIC2.43□□□□□ -2.02
THBS4P35443 SNORD87-201ENST00000364849 89 ntBASIC2.43□□□□□ -2.02
THBS4P35443 Y_RNA.297-201ENST00000364950 91 ntBASIC2.43□□□□□ -2.02
THBS4P35443 RNU6-209P-201ENST00000384118 107 ntBASIC2.43□□□□□ -2.02
THBS4P35443 Y_RNA.446-201ENST00000384178 104 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR586-201ENST00000385035 97 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR300-201ENST00000401138 83 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR1283-1-201ENST00000408494 87 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR1298-201ENST00000408783 112 ntBASIC2.43□□□□□ -2.02
THBS4P35443 RNU2-64P-201ENST00000411315 191 ntBASIC2.43□□□□□ -2.02
THBS4P35443 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.43□□□□□ -2.02
THBS4P35443 TOMM22P2-201ENST00000430735 237 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MTCO1P5-201ENST00000433573 344 ntBASIC2.43□□□□□ -2.02
THBS4P35443 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.43□□□□□ -2.02
THBS4P35443 AC105272.1-201ENST00000438604 198 ntBASIC2.43□□□□□ -2.02
THBS4P35443 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.43□□□□□ -2.02
THBS4P35443 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
THBS4P35443 AC003982.1-202ENST00000469928 248 ntBASIC2.43□□□□□ -2.02
THBS4P35443 RN7SKP132-201ENST00000516001 208 ntBASIC2.43□□□□□ -2.02
THBS4P35443 RNU6-182P-201ENST00000516970 105 ntBASIC2.43□□□□□ -2.02
THBS4P35443 NDUFA5P6-201ENST00000542110 379 ntBASIC2.43□□□□□ -2.02
THBS4P35443 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
THBS4P35443 AC055872.1-201ENST00000570978 278 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
THBS4P35443 ZNF861P-201ENST00000588126 639 ntBASIC2.43□□□□□ -2.02
THBS4P35443 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
THBS4P35443 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.43□□□□□ -2.02
THBS4P35443 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
THBS4P35443 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.43□□□□□ -2.02
THBS4P35443 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.42□□□□□ -2.02
THBS4P35443 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.42□□□□□ -2.02
THBS4P35443 RNU6-545P-201ENST00000362681 104 ntBASIC2.42□□□□□ -2.02
THBS4P35443 Y_RNA.83-201ENST00000363005 113 ntBASIC2.42□□□□□ -2.02
THBS4P35443 Y_RNA.136-201ENST00000363444 102 ntBASIC2.42□□□□□ -2.02
THBS4P35443 RNU6-324P-201ENST00000363957 106 ntBASIC2.42□□□□□ -2.02
THBS4P35443 Y_RNA.275-201ENST00000364726 110 ntBASIC2.42□□□□□ -2.02
THBS4P35443 SNORD58.1-201ENST00000391313 66 ntBASIC2.42□□□□□ -2.02
THBS4P35443 PIGPP3-201ENST00000425307 415 ntBASIC2.42□□□□□ -2.02
THBS4P35443 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
THBS4P35443 HMGN2P9-201ENST00000476875 229 ntBASIC2.42□□□□□ -2.02
THBS4P35443 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
THBS4P35443 SNORA81.3-201ENST00000517283 198 ntBASIC2.42□□□□□ -2.02
THBS4P35443 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.42□□□□□ -2.02
THBS4P35443 AC098479.1-201ENST00000609225 154 ntBASIC2.42□□□□□ -2.02
THBS4P35443 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
THBS4P35443 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.42□□□□□ -2.02
THBS4P35443 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
THBS4P35443 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
THBS4P35443 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
THBS4P35443 Y_RNA.29-201ENST00000362570 113 ntBASIC2.41□□□□□ -2.02
THBS4P35443 Y_RNA.101-201ENST00000363154 102 ntBASIC2.41□□□□□ -2.02
THBS4P35443 SNORA38-201ENST00000363946 132 ntBASIC2.41□□□□□ -2.02
THBS4P35443 Y_RNA.274-201ENST00000364714 101 ntBASIC2.41□□□□□ -2.02
THBS4P35443 RNU6-740P-201ENST00000364734 105 ntBASIC2.41□□□□□ -2.02
THBS4P35443 Y_RNA.418-201ENST00000384029 102 ntBASIC2.41□□□□□ -2.02
THBS4P35443 Y_RNA.785-201ENST00000384290 109 ntBASIC2.41□□□□□ -2.02
THBS4P35443 RNU6-1248P-201ENST00000391096 64 ntBASIC2.41□□□□□ -2.02
THBS4P35443 RNU2-54P-201ENST00000410299 190 ntBASIC2.41□□□□□ -2.02
THBS4P35443 RNU2-61P-201ENST00000411069 191 ntBASIC2.41□□□□□ -2.02
THBS4P35443 AC024067.1-201ENST00000426199 223 ntBASIC2.41□□□□□ -2.02
THBS4P35443 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.41□□□□□ -2.02
THBS4P35443 AL137159.1-201ENST00000452808 512 ntBASIC2.41□□□□□ -2.02
THBS4P35443 AL138752.1-201ENST00000452964 351 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms