Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 YWHAEP4-201ENST00000505390 198 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 AC096725.1-201ENST00000514266 313 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 RNU6-155P-201ENST00000516347 100 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
SLC6A4P31645 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC6A4P31645 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC6A4P31645 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC6A4P31645 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SLC6A4P31645 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLC6A4P31645 Y_RNA.101-201ENST00000363154 102 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNY1-201ENST00000364228 113 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNU6-1305P-201ENST00000364353 104 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 SNORA26.7-201ENST00000391288 122 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 MIR1283-1-201ENST00000408494 87 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNU7-14P-201ENST00000459331 62 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNU6-111P-201ENST00000517179 105 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 RNU2-12P-201ENST00000517216 168 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 AC109329.2-201ENST00000519658 482 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.7□□□□□ -1.98
SLC6A4P31645 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.7□□□□□ -1.98
SLC6A4P31645 AC022616.8-201ENST00000533569 253 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 AC091544.4-201ENST00000555268 342 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 MIR4753-201ENST00000585119 83 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
SLC6A4P31645 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SLC6A4P31645 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SLC6A4P31645 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 SNORD31B-201ENST00000364977 69 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 RNU6-546P-201ENST00000383991 107 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 RPL19P1-201ENST00000411635 428 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC6A4P31645 MTCO1P5-201ENST00000433573 344 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 RPL39P40-201ENST00000445481 146 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
SLC6A4P31645 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A4P31645 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 Y_RNA.700-201ENST00000516806 100 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 AP002001.1-203ENST00000534002 267 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 AL512605.2-201ENST00000592972 256 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
SLC6A4P31645 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A4P31645 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A4P31645 UBE2WP1-201ENST00000362030 340 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 RNU6-461P-201ENST00000364195 107 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 Y_RNA.277-201ENST00000364754 102 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 Y_RNA.539-201ENST00000384635 107 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AL357139.1-201ENST00000407792 426 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 RNU6-1199P-201ENST00000411249 104 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A4P31645 Z98949.2-201ENST00000440996 144 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AC090515.1-201ENST00000465295 476 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 HMGN2P9-201ENST00000476875 229 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A4P31645 RNU6-237P-201ENST00000515985 71 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 RNA5SP148-201ENST00000516527 94 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A4P31645 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A4P31645 AC009779.6-201ENST00000603972 165 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AC010900.2-201ENST00000604508 210 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 MIR6817-201ENST00000615588 66 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
SLC6A4P31645 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SLC6A4P31645 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
SLC6A4P31645 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
SLC6A4P31645 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A4P31645 AP006437.1-201ENST00000641440 3685 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 RNU6-338P-201ENST00000383888 105 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 Y_RNA.418-201ENST00000384029 102 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 MIR548B-201ENST00000385247 97 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SLC6A4P31645 MIR1185-2-201ENST00000408687 86 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 RNU2-32P-201ENST00000411193 191 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC6A4P31645 SNORA27.4-201ENST00000516650 95 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 AL162424.1-201ENST00000602325 221 ntBASIC2.67□□□□□ -1.98
SLC6A4P31645 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
SLC6A4P31645 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SLC6A4P31645 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A4P31645 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.66□□□□□ -1.98
SLC6A4P31645 RNU6-454P-201ENST00000364292 107 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 Y_RNA.243-201ENST00000364481 109 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 Y_RNA.275-201ENST00000364726 110 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 RNU6-200P-201ENST00000364743 107 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 SNORA70B-201ENST00000384210 135 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 MIR561-201ENST00000385216 97 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 U3.40-201ENST00000408706 208 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
SLC6A4P31645 MRPS10P1-201ENST00000448483 130 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 RPL23AP3-201ENST00000453844 468 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 AL139109.1-201ENST00000455491 297 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 AC016925.1-201ENST00000458303 298 ntBASIC2.66□□□□□ -1.98
SLC6A4P31645 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
SLC6A4P31645 AC091959.1-201ENST00000495857 238 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms