Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL356055.1-201ENST00000602528 446 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 SNRPGP17-201ENST00000603780 214 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC096772.1-201ENST00000609146 564 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 SCARNA4-201ENST00000629045 128 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AL606534.2-204ENST00000635008 178 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC005592.1-201ENST00000566527 1640 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-1115P-201ENST00000362490 106 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 Y_RNA.31-201ENST00000362574 102 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNA5SP62-201ENST00000363457 110 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-595P-201ENST00000363944 107 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 Y_RNA.252-201ENST00000364556 101 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 U3.13-201ENST00000364804 214 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 Y_RNA.314-201ENST00000365114 102 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-142P-201ENST00000384019 107 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-17P-201ENST00000384245 107 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-18P-201ENST00000384527 107 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 MIR606-201ENST00000384851 96 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 MIR521-1-201ENST00000384902 87 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 MIR513A1-201ENST00000385138 129 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-308P-201ENST00000390957 107 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNA5SP201-201ENST00000410316 124 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU2-49P-201ENST00000410666 184 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AC018865.2-201ENST00000423631 129 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AIMP1P2-201ENST00000425294 312 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 AL133396.1-201ENST00000432048 687 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AL353997.1-201ENST00000432936 108 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 MTCYBP6-201ENST00000441810 138 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 RPL30P15-201ENST00000457129 321 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AC016632.1-201ENST00000503994 196 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 SNORA25.11-201ENST00000515935 105 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 SCARNA15.1-201ENST00000516384 125 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-1198P-201ENST00000516904 67 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-612P-201ENST00000516909 102 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNA5SP54-201ENST00000516951 92 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-1213P-201ENST00000517075 94 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 RNU6-264P-201ENST00000517134 104 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.15□□□□□ -2.22
COL5A1P20908 AC006199.1-201ENST00000548728 219 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.15□□□□□ -2.22
COL5A1P20908 AC005520.5-201ENST00000613926 164 ntBASIC1.15□□□□□ -2.22
COL5A1P20908 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
COL5A1P20908 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
COL5A1P20908 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.15□□□□□ -2.23
COL5A1P20908 MTND5P9-201ENST00000503854 1755 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.15□□□□□ -2.23
COL5A1P20908 Z75746.1-201ENST00000440243 2080 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 Y_RNA.5-201ENST00000362334 102 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 snoU2_19.1-201ENST00000362361 80 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 RNU6-245P-201ENST00000384020 107 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 MIR216A-201ENST00000385063 110 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 RNU6-700P-201ENST00000391043 107 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 SNORA26.3-201ENST00000391119 136 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 SNORA12-201ENST00000391162 147 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 MTCYBP2-201ENST00000407745 171 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 RNA5SP494-201ENST00000410653 129 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.15□□□□□ -2.23
COL5A1P20908 AL160004.2-201ENST00000432935 350 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 MTND4P19-201ENST00000446659 478 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 RPL22P13-201ENST00000493291 347 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AC022447.4-201ENST00000504053 364 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.15□□□□□ -2.23
COL5A1P20908 RNU6-567P-201ENST00000516746 107 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 SCARNA11.3-201ENST00000517276 130 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AC109446.1-201ENST00000566172 220 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AL132822.1-201ENST00000617063 513 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AL138825.1-201ENST00000618587 192 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AC097372.5-201ENST00000623665 376 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 AL450472.1-202ENST00000637286 180 ntBASIC1.15□□□□□ -2.23
COL5A1P20908 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
COL5A1P20908 Y_RNA.68-201ENST00000362881 102 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 RNU6-490P-201ENST00000362985 107 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 RNU6-137P-201ENST00000363680 108 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 RNU6-1059P-201ENST00000363752 98 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 RNU6-1083P-201ENST00000384022 107 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 Y_RNA.527-201ENST00000384573 102 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AL590004.1-201ENST00000405321 300 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A1P20908 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A1P20908 AL357134.1-201ENST00000445848 426 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.14□□□□□ -2.23
COL5A1P20908 MTCO3P8-201ENST00000453691 755 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 MED28P2-201ENST00000475771 317 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 RNU6-120P-201ENST00000516077 103 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 SNORA31.6-201ENST00000516241 130 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AC091144.1-201ENST00000519573 138 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A1P20908 UBL5P4-201ENST00000562584 236 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A1P20908 CYP4A27P-201ENST00000567218 190 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 MIR4529-201ENST00000578110 78 ntBASIC1.14□□□□□ -2.23
COL5A1P20908 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A1P20908 PART1_1.1-201ENST00000611761 217 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms