Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC244505.4-201ENST00000434905 287 ntBASIC4.85□□□□□ -1.63
CD44P16070 SSXP5-201ENST00000443473 287 ntBASIC4.85□□□□□ -1.63
CD44P16070 HMGN2P18-201ENST00000450680 270 ntBASIC4.85□□□□□ -1.63
CD44P16070 SNORD108-201ENST00000459332 71 ntBASIC4.85□□□□□ -1.63
CD44P16070 RN7SL354P-201ENST00000469282 294 ntBASIC4.85□□□□□ -1.63
CD44P16070 AC106707.2-201ENST00000484182 374 ntBASIC4.85□□□□□ -1.63
CD44P16070 AC025554.1-201ENST00000505641 188 ntBASIC4.85□□□□□ -1.63
CD44P16070 AC112200.1-201ENST00000625015 234 ntBASIC4.85□□□□□ -1.63
CD44P16070 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.85□□□□□ -1.63
CD44P16070 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD44P16070 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD44P16070 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD44P16070 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD44P16070 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD44P16070 RNU6-865P-201ENST00000364772 107 ntBASIC4.84□□□□□ -1.63
CD44P16070 MIR633-201ENST00000384821 98 ntBASIC4.84□□□□□ -1.63
CD44P16070 MIR520H-201ENST00000385126 88 ntBASIC4.84□□□□□ -1.63
CD44P16070 MIR550A3-201ENST00000390735 95 ntBASIC4.84□□□□□ -1.63
CD44P16070 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.84□□□□□ -1.63
CD44P16070 IGKV1-32-201ENST00000519290 311 ntBASIC4.84□□□□□ -1.63
CD44P16070 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.84□□□□□ -1.63
CD44P16070 MIR4480-201ENST00000582492 71 ntBASIC4.84□□□□□ -1.63
CD44P16070 SNX18P1Y-201ENST00000616231 511 ntBASIC4.84□□□□□ -1.63
CD44P16070 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CD44P16070 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CD44P16070 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.83□□□□□ -1.64
CD44P16070 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD44P16070 AC097463.2-201ENST00000421074 142 ntBASIC4.83□□□□□ -1.64
CD44P16070 UBL5P3-201ENST00000475112 231 ntBASIC4.83□□□□□ -1.64
CD44P16070 AC079587.1-201ENST00000603846 277 ntBASIC4.83□□□□□ -1.64
CD44P16070 uc_338.14-201ENST00000613162 166 ntBASIC4.83□□□□□ -1.64
CD44P16070 AL592182.3-201ENST00000642132 3304 ntBASIC4.83□□□□□ -1.64
CD44P16070 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD44P16070 A2MP1-204ENST00000566278 4130 ntBASIC4.82□□□□□ -1.64
CD44P16070 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.82□□□□□ -1.64
CD44P16070 AL022322.2-201ENST00000624072 20397 ntBASIC4.82□□□□□ -1.64
CD44P16070 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CD44P16070 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
CD44P16070 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.82□□□□□ -1.64
CD44P16070 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 snoU2-30.2-201ENST00000362805 70 ntBASIC4.82□□□□□ -1.64
CD44P16070 SNORA58B-201ENST00000364259 136 ntBASIC4.82□□□□□ -1.64
CD44P16070 RNA5SP138-201ENST00000365098 114 ntBASIC4.82□□□□□ -1.64
CD44P16070 SNORA26.6-201ENST00000391256 115 ntBASIC4.82□□□□□ -1.64
CD44P16070 RNA5SP104-201ENST00000410989 118 ntBASIC4.82□□□□□ -1.64
CD44P16070 AC074348.1-201ENST00000426503 132 ntBASIC4.82□□□□□ -1.64
CD44P16070 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.82□□□□□ -1.64
CD44P16070 MIR4270-201ENST00000581799 70 ntBASIC4.82□□□□□ -1.64
CD44P16070 MIR3609-201ENST00000582661 80 ntBASIC4.82□□□□□ -1.64
CD44P16070 SNORD3E-202ENST00000627253 216 ntBASIC4.82□□□□□ -1.64
CD44P16070 AL355480.1-201ENST00000629041 99 ntBASIC4.82□□□□□ -1.64
CD44P16070 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.82□□□□□ -1.64
CD44P16070 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CD44P16070 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD44P16070 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.81□□□□□ -1.64
CD44P16070 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD44P16070 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD44P16070 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.81□□□□□ -1.64
CD44P16070 RNA5SP28-201ENST00000363841 119 ntBASIC4.81□□□□□ -1.64
CD44P16070 RNVU1-6-201ENST00000364688 164 ntBASIC4.81□□□□□ -1.64
CD44P16070 Y_RNA.448-201ENST00000384185 108 ntBASIC4.81□□□□□ -1.64
CD44P16070 MIR513A2-201ENST00000385249 127 ntBASIC4.81□□□□□ -1.64
CD44P16070 RNA5SP467-201ENST00000391274 118 ntBASIC4.81□□□□□ -1.64
CD44P16070 HMGN2P21-201ENST00000447764 270 ntBASIC4.81□□□□□ -1.64
CD44P16070 AC234781.5-201ENST00000508429 271 ntBASIC4.81□□□□□ -1.64
CD44P16070 CYP4A43P-201ENST00000568156 121 ntBASIC4.81□□□□□ -1.64
CD44P16070 AL627230.6-201ENST00000611129 280 ntBASIC4.81□□□□□ -1.64
CD44P16070 MIR6780A-201ENST00000615089 68 ntBASIC4.81□□□□□ -1.64
CD44P16070 U6.108-201ENST00000637764 58 ntBASIC4.81□□□□□ -1.64
CD44P16070 MAPK10-253ENST00000641010 4072 ntBASIC4.81□□□□□ -1.64
CD44P16070 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.81□□□□□ -1.64
CD44P16070 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CD44P16070 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CD44P16070 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD44P16070 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CD44P16070 MFSD8-216ENST00000641147 4009 ntBASIC4.8□□□□□ -1.64
CD44P16070 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CD44P16070 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.8□□□□□ -1.64
CD44P16070 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
CD44P16070 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD44P16070 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD44P16070 SNORD38.2-201ENST00000384470 69 ntBASIC4.8□□□□□ -1.64
CD44P16070 RN7SL504P-201ENST00000494496 287 ntBASIC4.8□□□□□ -1.64
CD44P16070 RNU6-303P-201ENST00000517091 106 ntBASIC4.8□□□□□ -1.64
CD44P16070 IGLV3-17-201ENST00000519099 244 ntBASIC4.8□□□□□ -1.64
CD44P16070 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC4.8□□□□□ -1.64
CD44P16070 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms