Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC073476.4-201ENST00000628409 72 ntBASIC3.59□□□□□ -1.83
BMP3P12645 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
BMP3P12645 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BMP3P12645 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.59□□□□□ -1.83
BMP3P12645 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
BMP3P12645 MIR22-201ENST00000362190 85 ntBASIC3.58□□□□□ -1.84
BMP3P12645 SNORD114-7-201ENST00000362520 77 ntBASIC3.58□□□□□ -1.84
BMP3P12645 Y_RNA.35-201ENST00000362601 101 ntBASIC3.58□□□□□ -1.84
BMP3P12645 Y_RNA.120-201ENST00000363304 110 ntBASIC3.58□□□□□ -1.84
BMP3P12645 RNU6-978P-201ENST00000364371 103 ntBASIC3.58□□□□□ -1.84
BMP3P12645 RNU6-1164P-201ENST00000364428 107 ntBASIC3.58□□□□□ -1.84
BMP3P12645 Y_RNA.500-201ENST00000384466 111 ntBASIC3.58□□□□□ -1.84
BMP3P12645 AC005921.1-201ENST00000510589 286 ntBASIC3.58□□□□□ -1.84
BMP3P12645 AC133485.4-201ENST00000561835 220 ntBASIC3.58□□□□□ -1.84
BMP3P12645 AC138907.4-201ENST00000570107 226 ntBASIC3.58□□□□□ -1.84
BMP3P12645 AC073308.1-201ENST00000623696 305 ntBASIC3.58□□□□□ -1.84
BMP3P12645 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.58□□□□□ -1.84
BMP3P12645 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BMP3P12645 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BMP3P12645 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
BMP3P12645 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BMP3P12645 Y_RNA.114-201ENST00000363265 113 ntBASIC3.57□□□□□ -1.84
BMP3P12645 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.57□□□□□ -1.84
BMP3P12645 SNORD116-21-201ENST00000384507 92 ntBASIC3.57□□□□□ -1.84
BMP3P12645 RNU6-748P-201ENST00000384648 107 ntBASIC3.57□□□□□ -1.84
BMP3P12645 RNU6-19P-201ENST00000384718 107 ntBASIC3.57□□□□□ -1.84
BMP3P12645 Z82209.1-201ENST00000422141 2135 ntBASIC3.57□□□□□ -1.84
BMP3P12645 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.57□□□□□ -1.84
BMP3P12645 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.57□□□□□ -1.84
BMP3P12645 RPS3P1-201ENST00000456781 192 ntBASIC3.57□□□□□ -1.84
BMP3P12645 Y_RNA.651-201ENST00000459380 103 ntBASIC3.57□□□□□ -1.84
BMP3P12645 SCARNA20.6-201ENST00000517251 106 ntBASIC3.57□□□□□ -1.84
BMP3P12645 AC138915.1-201ENST00000565427 1685 ntBASIC3.57□□□□□ -1.84
BMP3P12645 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.57□□□□□ -1.84
BMP3P12645 MIR3690-201ENST00000580266 75 ntBASIC3.57□□□□□ -1.84
BMP3P12645 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
BMP3P12645 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BMP3P12645 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BMP3P12645 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.56□□□□□ -1.84
BMP3P12645 SNORD116-13-201ENST00000384408 92 ntBASIC3.56□□□□□ -1.84
BMP3P12645 SNORA79-201ENST00000408376 140 ntBASIC3.56□□□□□ -1.84
BMP3P12645 MIR1183-201ENST00000408856 89 ntBASIC3.56□□□□□ -1.84
BMP3P12645 MLLT10P1-201ENST00000418346 262 ntBASIC3.56□□□□□ -1.84
BMP3P12645 COTL1P1-201ENST00000422309 375 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RPL23AP7-203ENST00000449021 469 ntBASIC3.56□□□□□ -1.84
BMP3P12645 AP000873.1-201ENST00000463987 400 ntBASIC3.56□□□□□ -1.84
BMP3P12645 AC006445.2-201ENST00000510061 472 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RNU6-1337P-201ENST00000516525 95 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RNU6-1061P-201ENST00000516530 99 ntBASIC3.56□□□□□ -1.84
BMP3P12645 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RNU6-844P-201ENST00000517175 102 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
BMP3P12645 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.56□□□□□ -1.84
BMP3P12645 MIR4644-201ENST00000579929 84 ntBASIC3.56□□□□□ -1.84
BMP3P12645 MIR6852-201ENST00000621699 66 ntBASIC3.56□□□□□ -1.84
BMP3P12645 AC006386.2-201ENST00000624491 75 ntBASIC3.56□□□□□ -1.84
BMP3P12645 AC012005.1-201ENST00000624575 75 ntBASIC3.56□□□□□ -1.84
BMP3P12645 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.56□□□□□ -1.84
BMP3P12645 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BMP3P12645 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BMP3P12645 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.56□□□□□ -1.84
BMP3P12645 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
BMP3P12645 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
BMP3P12645 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
BMP3P12645 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BMP3P12645 SNORD58C-201ENST00000365223 64 ntBASIC3.55□□□□□ -1.84
BMP3P12645 RNU6-1323P-201ENST00000384025 107 ntBASIC3.55□□□□□ -1.84
BMP3P12645 MIR518C-201ENST00000384822 101 ntBASIC3.55□□□□□ -1.84
BMP3P12645 Y_RNA.587-201ENST00000391210 103 ntBASIC3.55□□□□□ -1.84
BMP3P12645 AL355796.1-201ENST00000406706 323 ntBASIC3.55□□□□□ -1.84
BMP3P12645 MIR1185-2-201ENST00000408687 86 ntBASIC3.55□□□□□ -1.84
BMP3P12645 RN7SKP101-201ENST00000411376 320 ntBASIC3.55□□□□□ -1.84
BMP3P12645 RNU6-197P-201ENST00000516680 100 ntBASIC3.55□□□□□ -1.84
BMP3P12645 RPL30P11-203ENST00000598995 310 ntBASIC3.55□□□□□ -1.84
BMP3P12645 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BMP3P12645 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BMP3P12645 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
BMP3P12645 AC008555.8-201ENST00000623602 2168 ntBASIC3.54□□□□□ -1.84
BMP3P12645 AL159152.1-201ENST00000635019 2587 ntBASIC3.54□□□□□ -1.84
BMP3P12645 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
BMP3P12645 SNORD114-19-201ENST00000363072 75 ntBASIC3.54□□□□□ -1.84
BMP3P12645 RNA5SP189-201ENST00000364920 115 ntBASIC3.54□□□□□ -1.84
BMP3P12645 RNU6-484P-201ENST00000384016 107 ntBASIC3.54□□□□□ -1.84
BMP3P12645 MIR548A3-201ENST00000385297 97 ntBASIC3.54□□□□□ -1.84
BMP3P12645 MIR873-201ENST00000401120 77 ntBASIC3.54□□□□□ -1.84
BMP3P12645 Y_RNA.617-201ENST00000410920 90 ntBASIC3.54□□□□□ -1.84
BMP3P12645 RPL23AP62-201ENST00000463396 453 ntBASIC3.54□□□□□ -1.84
BMP3P12645 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.54□□□□□ -1.84
BMP3P12645 POLR3GP1-201ENST00000594073 261 ntBASIC3.54□□□□□ -1.84
BMP3P12645 AC110741.2-201ENST00000605278 268 ntBASIC3.54□□□□□ -1.84
BMP3P12645 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.54□□□□□ -1.84
BMP3P12645 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.54□□□□□ -1.84
BMP3P12645 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BMP3P12645 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BMP3P12645 SNORA80A-201ENST00000363922 136 ntBASIC3.53□□□□□ -1.84
BMP3P12645 RNU6-1305P-201ENST00000364353 104 ntBASIC3.53□□□□□ -1.84
BMP3P12645 Y_RNA.495-201ENST00000384435 112 ntBASIC3.53□□□□□ -1.84
BMP3P12645 MIR586-201ENST00000385035 97 ntBASIC3.53□□□□□ -1.84
BMP3P12645 RNA5SP496-201ENST00000391240 109 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms