Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 AC138915.1-201ENST00000565427 1685 ntBASIC3.62□□□□□ -1.83
RARAP10276 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RARAP10276 RNU6-944P-201ENST00000364023 107 ntBASIC3.62□□□□□ -1.83
RARAP10276 RNU6-117P-201ENST00000365415 107 ntBASIC3.62□□□□□ -1.83
RARAP10276 SNORA5A-201ENST00000384111 134 ntBASIC3.62□□□□□ -1.83
RARAP10276 MIR491-201ENST00000384877 84 ntBASIC3.62□□□□□ -1.83
RARAP10276 MIR767-201ENST00000390228 109 ntBASIC3.62□□□□□ -1.83
RARAP10276 MLLT10P1-201ENST00000418346 262 ntBASIC3.62□□□□□ -1.83
RARAP10276 CYCSP4-201ENST00000429682 331 ntBASIC3.62□□□□□ -1.83
RARAP10276 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.62□□□□□ -1.83
RARAP10276 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.62□□□□□ -1.83
RARAP10276 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.62□□□□□ -1.83
RARAP10276 AL031183.1-201ENST00000457667 207 ntBASIC3.62□□□□□ -1.83
RARAP10276 SNORD33.1-201ENST00000516213 88 ntBASIC3.62□□□□□ -1.83
RARAP10276 RNU1-45P-201ENST00000517191 141 ntBASIC3.62□□□□□ -1.83
RARAP10276 MIR4679-2-201ENST00000578358 77 ntBASIC3.62□□□□□ -1.83
RARAP10276 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.62□□□□□ -1.83
RARAP10276 AC108081.1-201ENST00000604358 221 ntBASIC3.62□□□□□ -1.83
RARAP10276 AC096577.2-201ENST00000611455 153 ntBASIC3.62□□□□□ -1.83
RARAP10276 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.62□□□□□ -1.83
RARAP10276 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
RARAP10276 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.62□□□□□ -1.83
RARAP10276 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RARAP10276 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RARAP10276 MFSD8-233ENST00000641482 4860 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC093908.1-201ENST00000623125 8092 ntBASIC3.61□□□□□ -1.83
RARAP10276 Z82209.1-201ENST00000422141 2135 ntBASIC3.61□□□□□ -1.83
RARAP10276 Y_RNA.114-201ENST00000363265 113 ntBASIC3.61□□□□□ -1.83
RARAP10276 SNORD31B-201ENST00000364977 69 ntBASIC3.61□□□□□ -1.83
RARAP10276 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
RARAP10276 RNU6-1274P-201ENST00000384557 107 ntBASIC3.61□□□□□ -1.83
RARAP10276 MIR181A2-201ENST00000384863 110 ntBASIC3.61□□□□□ -1.83
RARAP10276 RNU6ATAC-201ENST00000408749 126 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
RARAP10276 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.61□□□□□ -1.83
RARAP10276 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC083906.5-201ENST00000503722 328 ntBASIC3.61□□□□□ -1.83
RARAP10276 PHBP14-201ENST00000512887 367 ntBASIC3.61□□□□□ -1.83
RARAP10276 SNORA31.1-201ENST00000515993 133 ntBASIC3.61□□□□□ -1.83
RARAP10276 SNORA31.5-201ENST00000516190 133 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC025647.1-201ENST00000517879 253 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC131055.1-201ENST00000584626 316 ntBASIC3.61□□□□□ -1.83
RARAP10276 MIR4765-201ENST00000585007 77 ntBASIC3.61□□□□□ -1.83
RARAP10276 AL929325.1-201ENST00000603096 117 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC039056.2-201ENST00000622261 511 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC006435.5-201ENST00000624486 112 ntBASIC3.61□□□□□ -1.83
RARAP10276 AC009093.8-201ENST00000641769 292 ntBASIC3.61□□□□□ -1.83
RARAP10276 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
RARAP10276 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
RARAP10276 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RARAP10276 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RARAP10276 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RARAP10276 RNU4-13P-201ENST00000364019 141 ntBASIC3.6□□□□□ -1.83
RARAP10276 SNORA73.2-201ENST00000364946 201 ntBASIC3.6□□□□□ -1.83
RARAP10276 RNU6-147P-201ENST00000383983 107 ntBASIC3.6□□□□□ -1.83
RARAP10276 SNORA72-201ENST00000384339 132 ntBASIC3.6□□□□□ -1.83
RARAP10276 AP000567.1-201ENST00000406413 156 ntBASIC3.6□□□□□ -1.83
RARAP10276 Y_RNA.630-201ENST00000411370 108 ntBASIC3.6□□□□□ -1.83
RARAP10276 AC063976.4-201ENST00000421971 163 ntBASIC3.6□□□□□ -1.83
RARAP10276 AC106707.2-201ENST00000484182 374 ntBASIC3.6□□□□□ -1.83
RARAP10276 RNA5SP112-201ENST00000515937 99 ntBASIC3.6□□□□□ -1.83
RARAP10276 RNA5SP153-201ENST00000516498 76 ntBASIC3.6□□□□□ -1.83
RARAP10276 AC133485.4-201ENST00000561835 220 ntBASIC3.6□□□□□ -1.83
RARAP10276 AC138907.4-201ENST00000570107 226 ntBASIC3.6□□□□□ -1.83
RARAP10276 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.6□□□□□ -1.83
RARAP10276 SCARNA15.3-201ENST00000626315 122 ntBASIC3.6□□□□□ -1.83
RARAP10276 SCARNA4.1-201ENST00000628597 123 ntBASIC3.6□□□□□ -1.83
RARAP10276 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RARAP10276 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
RARAP10276 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RARAP10276 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RARAP10276 AC009487.4-201ENST00000624969 3585 ntBASIC3.59□□□□□ -1.83
RARAP10276 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RARAP10276 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.83
RARAP10276 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.59□□□□□ -1.83
RARAP10276 SNORA63.1-201ENST00000362493 131 ntBASIC3.59□□□□□ -1.83
RARAP10276 RNU1-105P-201ENST00000363470 161 ntBASIC3.59□□□□□ -1.83
RARAP10276 PTMAP2-201ENST00000397627 327 ntBASIC3.59□□□□□ -1.83
RARAP10276 NDUFB4P4-201ENST00000404822 243 ntBASIC3.59□□□□□ -1.83
RARAP10276 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.59□□□□□ -1.83
RARAP10276 HMGN2P7-201ENST00000456186 273 ntBASIC3.59□□□□□ -1.83
RARAP10276 AC080013.2-201ENST00000460866 323 ntBASIC3.59□□□□□ -1.83
RARAP10276 RN7SL542P-201ENST00000467147 294 ntBASIC3.59□□□□□ -1.83
RARAP10276 SNORD77.4-201ENST00000516158 81 ntBASIC3.59□□□□□ -1.83
RARAP10276 SNORA70.24-201ENST00000517233 118 ntBASIC3.59□□□□□ -1.83
RARAP10276 AC097639.2-201ENST00000603159 172 ntBASIC3.59□□□□□ -1.83
RARAP10276 CR392039.5-201ENST00000623201 510 ntBASIC3.59□□□□□ -1.83
RARAP10276 AC012442.3-202ENST00000636742 206 ntBASIC3.59□□□□□ -1.83
RARAP10276 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
RARAP10276 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.59□□□□□ -1.84
RARAP10276 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
RARAP10276 Y_RNA.91-201ENST00000363042 107 ntBASIC3.58□□□□□ -1.84
RARAP10276 RNU6-1255P-201ENST00000363434 112 ntBASIC3.58□□□□□ -1.84
RARAP10276 SNORD6-201ENST00000365444 73 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms