Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 Y_RNA.229-201ENST00000364347 113 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-147P-201ENST00000383983 107 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 MIR526A2-201ENST00000390198 65 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 AL158823.1-201ENST00000418441 478 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 RN7SL429P-201ENST00000479090 223 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 RN7SL489P-201ENST00000486185 223 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 RN7SL327P-201ENST00000488659 223 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 HSPE1P18-201ENST00000517602 280 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 AC090049.2-201ENST00000550377 109 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 MIR3646-201ENST00000578301 84 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 MIR486-1-201ENST00000612171 68 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 TCL6_2.1-201ENST00000615162 119 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 RN7SL853P-201ENST00000617250 223 ntBASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CSB-PGBD3P0DP91 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CSB-PGBD3P0DP91 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-235P-201ENST00000362644 107 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 AL606845.1-201ENST00000404881 255 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 AC004386.2-201ENST00000441858 148 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 RNU7-141P-201ENST00000459304 62 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 AC107934.2-201ENST00000518653 310 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 MTND5P34-201ENST00000568888 325 ntBASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.27□□□□□ -1.73
CSB-PGBD3P0DP91 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-486P-201ENST00000363116 107 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-915P-201ENST00000364943 103 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.310-201ENST00000365063 113 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.368-201ENST00000365547 113 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA18.2-201ENST00000383865 132 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA7.4-201ENST00000384249 137 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-855P-201ENST00000410395 104 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 AC022018.1-201ENST00000430685 241 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 AL357134.1-201ENST00000445848 426 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 MIR5006-201ENST00000583027 110 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 AC008739.2-201ENST00000597006 317 ntBASIC4.26□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-1205P-201ENST00000363625 106 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.243-201ENST00000364481 109 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-301P-201ENST00000384277 107 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA12-201ENST00000391162 147 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 Z98941.1-201ENST00000407764 100 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 RNA5SP504-201ENST00000410676 117 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 SCARNA11.3-201ENST00000517276 130 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 AC024614.2-201ENST00000577584 372 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 AC017071.1-201ENST00000564407 2204 ntBASIC4.25□□□□□ -1.73
CSB-PGBD3P0DP91 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA71.1-201ENST00000364523 117 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.341-201ENST00000365341 102 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.393-201ENST00000383936 102 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA40.5-201ENST00000391061 128 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 RNA5SP89-201ENST00000410300 108 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 HSPE1P13-201ENST00000451143 297 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-344P-201ENST00000516635 111 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 SNORD11B-201ENST00000607707 90 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AC107294.3-201ENST00000609211 526 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AC090517.3-201ENST00000625170 141 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AC009487.2-201ENST00000420969 6821 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 AC000403.1-201ENST00000613696 3585 ntBASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSB-PGBD3P0DP91 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 SNORA25.7-201ENST00000364375 127 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 Y_RNA.521-201ENST00000384560 114 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 MIR29B2-201ENST00000385055 81 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-710P-201ENST00000410424 105 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 AL159169.1-201ENST00000421119 127 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 RPS27P1-201ENST00000450552 247 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 RNU5E-3P-201ENST00000515913 68 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 RNU2-44P-201ENST00000516795 194 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 MIR3914-2-201ENST00000637339 95 ntBASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CSB-PGBD3P0DP91 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 MIR449A-201ENST00000362113 91 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms