Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.83□□□□□ -2.28
CLTAP09496 SNORD3E-202ENST00000627253 216 ntBASIC0.83□□□□□ -2.28
CLTAP09496 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
CLTAP09496 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
CLTAP09496 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
CLTAP09496 SNORD50.1-201ENST00000362987 71 ntBASIC0.82□□□□□ -2.28
CLTAP09496 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
CLTAP09496 Y_RNA.481-201ENST00000384373 102 ntBASIC0.82□□□□□ -2.28
CLTAP09496 MIR518E-201ENST00000385252 88 ntBASIC0.82□□□□□ -2.28
CLTAP09496 Y_RNA.582-201ENST00000391023 95 ntBASIC0.82□□□□□ -2.28
CLTAP09496 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
CLTAP09496 MTND3P16-201ENST00000452205 344 ntBASIC0.82□□□□□ -2.28
CLTAP09496 RNU7-94P-201ENST00000459576 63 ntBASIC0.82□□□□□ -2.28
CLTAP09496 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
CLTAP09496 RNA5SP454-201ENST00000517231 127 ntBASIC0.82□□□□□ -2.28
CLTAP09496 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
CLTAP09496 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
CLTAP09496 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
CLTAP09496 SNORD113-7-201ENST00000363762 77 ntBASIC0.81□□□□□ -2.28
CLTAP09496 SNORD115-32-201ENST00000364079 82 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RNU4-9P-201ENST00000364951 139 ntBASIC0.81□□□□□ -2.28
CLTAP09496 MIR660-201ENST00000385235 97 ntBASIC0.81□□□□□ -2.28
CLTAP09496 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
CLTAP09496 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CLTAP09496 RNU6-910P-201ENST00000390844 107 ntBASIC0.81□□□□□ -2.28
CLTAP09496 SNORA12.1-201ENST00000390873 148 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
CLTAP09496 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.81□□□□□ -2.28
CLTAP09496 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.81□□□□□ -2.28
CLTAP09496 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.81□□□□□ -2.28
CLTAP09496 AL353572.1-201ENST00000442490 417 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RPS4XP11-201ENST00000446897 772 ntBASIC0.81□□□□□ -2.28
CLTAP09496 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.81□□□□□ -2.28
CLTAP09496 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
CLTAP09496 SNORA25.14-201ENST00000516481 132 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RNU6-58P-201ENST00000517143 103 ntBASIC0.81□□□□□ -2.28
CLTAP09496 AC011604.1-201ENST00000545978 196 ntBASIC0.81□□□□□ -2.28
CLTAP09496 SNORA4-201ENST00000584302 138 ntBASIC0.81□□□□□ -2.28
CLTAP09496 RNU6-1266P-201ENST00000362794 105 ntBASIC0.8□□□□□ -2.28
CLTAP09496 RNU6-137P-201ENST00000363680 108 ntBASIC0.8□□□□□ -2.28
CLTAP09496 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
CLTAP09496 MIR514A2-201ENST00000385131 88 ntBASIC0.8□□□□□ -2.28
CLTAP09496 MIR514A3-201ENST00000385132 88 ntBASIC0.8□□□□□ -2.28
CLTAP09496 MIR653-201ENST00000385279 96 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AL590002.1-201ENST00000406554 418 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.8□□□□□ -2.28
CLTAP09496 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.8□□□□□ -2.28
CLTAP09496 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.8□□□□□ -2.28
CLTAP09496 AC079354.2-201ENST00000453523 154 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AC105758.1-201ENST00000506038 399 ntBASIC0.8□□□□□ -2.28
CLTAP09496 RNA5SP220-201ENST00000516298 104 ntBASIC0.8□□□□□ -2.28
CLTAP09496 Y_RNA.673-201ENST00000516306 88 ntBASIC0.8□□□□□ -2.28
CLTAP09496 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
CLTAP09496 RNU6-922P-201ENST00000516753 99 ntBASIC0.8□□□□□ -2.28
CLTAP09496 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.8□□□□□ -2.28
CLTAP09496 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.8□□□□□ -2.28
CLTAP09496 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
CLTAP09496 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CLTAP09496 SNORD87-201ENST00000364849 89 ntBASIC0.79□□□□□ -2.28
CLTAP09496 RNU6-128P-201ENST00000383976 107 ntBASIC0.79□□□□□ -2.28
CLTAP09496 RNY1P14-201ENST00000384426 108 ntBASIC0.79□□□□□ -2.28
CLTAP09496 MIR32-201ENST00000384965 70 ntBASIC0.79□□□□□ -2.28
CLTAP09496 CALM2P3-201ENST00000400429 449 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC006461.1-201ENST00000412637 326 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.79□□□□□ -2.28
CLTAP09496 AC245047.7-201ENST00000440265 293 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.79□□□□□ -2.28
CLTAP09496 RNU6-835P-201ENST00000516974 104 ntBASIC0.79□□□□□ -2.28
CLTAP09496 DEFB108E-201ENST00000524692 240 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AK6P2-201ENST00000549020 471 ntBASIC0.79□□□□□ -2.28
CLTAP09496 FRG2DP-202ENST00000566967 323 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.79□□□□□ -2.28
CLTAP09496 AC008088.1-201ENST00000580993 280 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC119751.7-201ENST00000600494 245 ntBASIC0.79□□□□□ -2.28
CLTAP09496 AC006504.8-201ENST00000621046 635 ntBASIC0.79□□□□□ -2.28
CLTAP09496 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
CLTAP09496 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.79□□□□□ -2.28
CLTAP09496 Y_RNA.553-201ENST00000384670 102 ntBASIC0.78□□□□□ -2.28
CLTAP09496 MIR153-2-201ENST00000385225 87 ntBASIC0.78□□□□□ -2.28
CLTAP09496 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
CLTAP09496 RNU6-648P-201ENST00000410190 107 ntBASIC0.78□□□□□ -2.28
CLTAP09496 AC063976.4-201ENST00000421971 163 ntBASIC0.78□□□□□ -2.28
CLTAP09496 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
CLTAP09496 MTCO1P19-201ENST00000443487 500 ntBASIC0.78□□□□□ -2.28
CLTAP09496 SNORD79.1-201ENST00000516069 84 ntBASIC0.78□□□□□ -2.28
CLTAP09496 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.78□□□□□ -2.28
CLTAP09496 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.78□□□□□ -2.28
CLTAP09496 SNORA28-201ENST00000606769 126 ntBASIC0.78□□□□□ -2.28
CLTAP09496 AC008163.1-202ENST00000636004 2889 ntBASIC0.78□□□□□ -2.29
CLTAP09496 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
CLTAP09496 RNU6-254P-201ENST00000363377 107 ntBASIC0.77□□□□□ -2.29
CLTAP09496 RNU6-522P-201ENST00000364497 107 ntBASIC0.77□□□□□ -2.29
CLTAP09496 Y_RNA.319-201ENST00000365138 92 ntBASIC0.77□□□□□ -2.29
CLTAP09496 RNU6-790P-201ENST00000384479 105 ntBASIC0.77□□□□□ -2.29
CLTAP09496 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
CLTAP09496 Z82188.1-201ENST00000436709 154 ntBASIC0.77□□□□□ -2.29
CLTAP09496 RNU7-187P-201ENST00000458985 68 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms