Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP000484.1-201ENST00000620067 1252 ntBASIC-0.78□□□□□ -2.53
APOBP04114 RNU6-512P-201ENST00000364438 103 ntBASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-576P-201ENST00000390854 102 ntBASIC-0.79□□□□□ -2.54
APOBP04114 CDK8P2-201ENST00000415020 547 ntBASIC-0.79□□□□□ -2.54
APOBP04114 HSFY7P-201ENST00000432672 318 ntBASIC-0.79□□□□□ -2.54
APOBP04114 HSFY8P-201ENST00000437934 318 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC016632.1-201ENST00000503994 196 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC025459.1-201ENST00000504072 156 ntBASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-135P-201ENST00000516769 101 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR8054-201ENST00000620877 86 ntBASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-424P-201ENST00000384367 105 ntBASIC-0.79□□□□□ -2.54
APOBP04114 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.79□□□□□ -2.54
APOBP04114 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.79□□□□□ -2.54
APOBP04114 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-703P-201ENST00000516946 107 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR3179-1-201ENST00000578940 84 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR3179-2-201ENST00000579107 84 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR3179-3-201ENST00000579566 84 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.79□□□□□ -2.54
APOBP04114 MIR3179-4-201ENST00000617599 84 ntBASIC-0.79□□□□□ -2.54
APOBP04114 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.79□□□□□ -2.54
APOBP04114 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR300-201ENST00000401138 83 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.79□□□□□ -2.54
APOBP04114 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.79□□□□□ -2.54
APOBP04114 TMF1P1-201ENST00000576058 373 ntBASIC-0.79□□□□□ -2.54
APOBP04114 MIR4804-201ENST00000581683 73 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AL161798.1-201ENST00000604630 131 ntBASIC-0.79□□□□□ -2.54
APOBP04114 BX322639.1-202ENST00000423987 2213 ntBASIC-0.79□□□□□ -2.54
APOBP04114 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.79□□□□□ -2.54
APOBP04114 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC022028.1-201ENST00000412054 408 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC074290.1-201ENST00000448883 135 ntBASIC-0.79□□□□□ -2.54
APOBP04114 AC010531.2-201ENST00000465012 153 ntBASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-475P-201ENST00000516073 104 ntBASIC-0.79□□□□□ -2.54
APOBP04114 RNU6-223P-201ENST00000362830 107 ntBASIC-0.8□□□□□ -2.54
APOBP04114 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.8□□□□□ -2.54
APOBP04114 RNA5SP169-201ENST00000517268 117 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC104260.1-201ENST00000616660 539 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC099786.3-201ENST00000565735 1410 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AL031779.1-201ENST00000415663 330 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC244250.2-201ENST00000418731 148 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.8□□□□□ -2.54
APOBP04114 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.8□□□□□ -2.54
APOBP04114 SNORA18.7-201ENST00000516910 131 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.8□□□□□ -2.54
APOBP04114 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.8□□□□□ -2.54
APOBP04114 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.8□□□□□ -2.54
APOBP04114 AL353997.1-201ENST00000432936 108 ntBASIC-0.8□□□□□ -2.54
APOBP04114 SUMO1P2-201ENST00000452524 304 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.8□□□□□ -2.54
APOBP04114 RNU1-142P-201ENST00000516682 145 ntBASIC-0.8□□□□□ -2.54
APOBP04114 AC134878.1-201ENST00000619901 243 ntBASIC-0.8□□□□□ -2.54
APOBP04114 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.81□□□□□ -2.54
APOBP04114 MTND1P21-201ENST00000412991 285 ntBASIC-0.81□□□□□ -2.54
APOBP04114 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.81□□□□□ -2.54
APOBP04114 PCNPP5-201ENST00000452246 481 ntBASIC-0.81□□□□□ -2.54
APOBP04114 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.81□□□□□ -2.54
APOBP04114 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 MTCO3P15-201ENST00000526563 574 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC138749.4-201ENST00000563970 127 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 AC010525.2-201ENST00000590920 195 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AL450472.1-202ENST00000637286 180 ntBASIC-0.81□□□□□ -2.54
APOBP04114 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.81□□□□□ -2.54
APOBP04114 RNU6-702P-201ENST00000364982 107 ntBASIC-0.81□□□□□ -2.54
APOBP04114 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.81□□□□□ -2.54
APOBP04114 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.81□□□□□ -2.54
APOBP04114 MIR4778-201ENST00000577635 80 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 AC005609.4-201ENST00000625071 447 ntBASIC-0.81□□□□□ -2.54
APOBP04114 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.81□□□□□ -2.54
APOBP04114 U8.6-201ENST00000364939 135 ntBASIC-0.81□□□□□ -2.54
APOBP04114 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.81□□□□□ -2.54
APOBP04114 RPL39P34-201ENST00000477141 156 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC026616.1-201ENST00000523157 525 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC109446.1-201ENST00000566172 220 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.81□□□□□ -2.54
APOBP04114 MIR562-201ENST00000384894 95 ntBASIC-0.81□□□□□ -2.54
APOBP04114 MIR147A-201ENST00000385079 72 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.81□□□□□ -2.54
APOBP04114 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.81□□□□□ -2.54
APOBP04114 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.81□□□□□ -2.54
APOBP04114 RNU6-880P-201ENST00000384526 107 ntBASIC-0.82□□□□□ -2.54
APOBP04114 MTCO2P33-201ENST00000402100 465 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNA5SP390-201ENST00000410191 113 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AL355994.1-201ENST00000424379 260 ntBASIC-0.82□□□□□ -2.54
APOBP04114 PSMA6P3-201ENST00000428242 164 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU6-469P-201ENST00000516253 101 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AC006600.1-201ENST00000572529 153 ntBASIC-0.82□□□□□ -2.54
APOBP04114 MIR4753-201ENST00000585119 83 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU4-28P-201ENST00000364739 141 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU6-637P-201ENST00000384050 107 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNA5SP95-201ENST00000410319 137 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.82□□□□□ -2.54
APOBP04114 AL606517.1-201ENST00000446914 387 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms