Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.16-201ENST00000362421 102 ntBASIC2.24□□□□□ -2.05
LDLRP01130 SNORD27-201ENST00000363981 72 ntBASIC2.24□□□□□ -2.05
LDLRP01130 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
LDLRP01130 RNA5SP240-201ENST00000365355 128 ntBASIC2.24□□□□□ -2.05
LDLRP01130 RNU6-378P-201ENST00000384324 107 ntBASIC2.24□□□□□ -2.05
LDLRP01130 RNY3P4-201ENST00000384428 101 ntBASIC2.24□□□□□ -2.05
LDLRP01130 SNORA26.3-201ENST00000391119 136 ntBASIC2.24□□□□□ -2.05
LDLRP01130 MIR208B-201ENST00000401172 77 ntBASIC2.24□□□□□ -2.05
LDLRP01130 AL358453.1-201ENST00000422522 250 ntBASIC2.24□□□□□ -2.05
LDLRP01130 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LDLRP01130 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.24□□□□□ -2.05
LDLRP01130 AF186996.7-201ENST00000492781 209 ntBASIC2.24□□□□□ -2.05
LDLRP01130 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
LDLRP01130 AL512605.2-201ENST00000592972 256 ntBASIC2.24□□□□□ -2.05
LDLRP01130 AC009779.6-201ENST00000603972 165 ntBASIC2.24□□□□□ -2.05
LDLRP01130 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.24□□□□□ -2.05
LDLRP01130 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.24□□□□□ -2.05
LDLRP01130 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.24□□□□□ -2.05
LDLRP01130 U6.104-201ENST00000637979 90 ntBASIC2.24□□□□□ -2.05
LDLRP01130 RNU6-222P-201ENST00000362438 107 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU6-1301P-201ENST00000362724 104 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU5B-2P-201ENST00000363036 113 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU1-23P-201ENST00000363361 144 ntBASIC2.23□□□□□ -2.05
LDLRP01130 Y_RNA.143-201ENST00000363520 106 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU6-1062P-201ENST00000383908 107 ntBASIC2.23□□□□□ -2.05
LDLRP01130 Y_RNA.462-201ENST00000384268 102 ntBASIC2.23□□□□□ -2.05
LDLRP01130 Y_RNA.515-201ENST00000384535 112 ntBASIC2.23□□□□□ -2.05
LDLRP01130 Y_RNA.541-201ENST00000384640 113 ntBASIC2.23□□□□□ -2.05
LDLRP01130 MIR29B2-201ENST00000385055 81 ntBASIC2.23□□□□□ -2.05
LDLRP01130 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LDLRP01130 RNA5SP213-201ENST00000391031 106 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AL079342.1-201ENST00000401460 267 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AL603910.2-201ENST00000407268 136 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU2-20P-201ENST00000410425 191 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU7-87P-201ENST00000459343 62 ntBASIC2.23□□□□□ -2.05
LDLRP01130 TOMM22P6-201ENST00000465035 409 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AC087477.1-201ENST00000465747 340 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RPL23AP75-201ENST00000491601 451 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU7-175P-201ENST00000515915 61 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU6-1012P-201ENST00000516606 109 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
LDLRP01130 RNU6-567P-201ENST00000516746 107 ntBASIC2.23□□□□□ -2.05
LDLRP01130 HSPE1P18-201ENST00000517602 280 ntBASIC2.23□□□□□ -2.05
LDLRP01130 DEFB108E-201ENST00000524692 240 ntBASIC2.23□□□□□ -2.05
LDLRP01130 CYP4A27P-201ENST00000567218 190 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.23□□□□□ -2.05
LDLRP01130 AC130289.1-201ENST00000577321 73 ntBASIC2.23□□□□□ -2.05
LDLRP01130 MIR4643-201ENST00000577473 78 ntBASIC2.23□□□□□ -2.05
LDLRP01130 AC240442.1-201ENST00000616055 283 ntBASIC2.23□□□□□ -2.05
LDLRP01130 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
LDLRP01130 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
LDLRP01130 LINC02555-201ENST00000563933 1951 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AL391987.6-201ENST00000305671 199 ntBASIC2.22□□□□□ -2.05
LDLRP01130 RNY1-201ENST00000364228 113 ntBASIC2.22□□□□□ -2.05
LDLRP01130 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
LDLRP01130 Y_RNA.439-201ENST00000384119 94 ntBASIC2.22□□□□□ -2.05
LDLRP01130 RNU6-318P-201ENST00000384283 103 ntBASIC2.22□□□□□ -2.05
LDLRP01130 Y_RNA.785-201ENST00000384290 109 ntBASIC2.22□□□□□ -2.05
LDLRP01130 RNU6-102P-201ENST00000384485 104 ntBASIC2.22□□□□□ -2.05
LDLRP01130 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LDLRP01130 SNORA46.1-201ENST00000391069 153 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
LDLRP01130 MRPL35P1-201ENST00000404272 572 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.22□□□□□ -2.05
LDLRP01130 MTND5P15-201ENST00000434246 349 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AC096638.1-201ENST00000444678 216 ntBASIC2.22□□□□□ -2.05
LDLRP01130 snoU13.30-201ENST00000458951 104 ntBASIC2.22□□□□□ -2.05
LDLRP01130 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
LDLRP01130 RNU6-1338P-201ENST00000516328 91 ntBASIC2.22□□□□□ -2.05
LDLRP01130 Y_RNA.713-201ENST00000517013 96 ntBASIC2.22□□□□□ -2.05
LDLRP01130 IGLV3-17-201ENST00000519099 244 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AC016256.1-201ENST00000547971 354 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AC090617.3-201ENST00000573670 475 ntBASIC2.22□□□□□ -2.05
LDLRP01130 AC011476.5-201ENST00000615594 130 ntBASIC2.22□□□□□ -2.05
LDLRP01130 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.22□□□□□ -2.05
LDLRP01130 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LDLRP01130 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.21□□□□□ -2.06
LDLRP01130 Y_RNA.274-201ENST00000364714 101 ntBASIC2.21□□□□□ -2.06
LDLRP01130 RNU4-9P-201ENST00000364951 139 ntBASIC2.21□□□□□ -2.06
LDLRP01130 RNU6-17P-201ENST00000384245 107 ntBASIC2.21□□□□□ -2.06
LDLRP01130 RNU6-937P-201ENST00000384325 106 ntBASIC2.21□□□□□ -2.06
LDLRP01130 RNU6-18P-201ENST00000384527 107 ntBASIC2.21□□□□□ -2.06
LDLRP01130 MIR32-201ENST00000384965 70 ntBASIC2.21□□□□□ -2.06
LDLRP01130 MIR487A-201ENST00000385009 80 ntBASIC2.21□□□□□ -2.06
LDLRP01130 MIR549A-201ENST00000385268 96 ntBASIC2.21□□□□□ -2.06
LDLRP01130 Y_RNA.581-201ENST00000391017 97 ntBASIC2.21□□□□□ -2.06
LDLRP01130 MIR548H3-201ENST00000408771 118 ntBASIC2.21□□□□□ -2.06
LDLRP01130 Y_RNA.706-201ENST00000516933 99 ntBASIC2.21□□□□□ -2.06
LDLRP01130 AC098479.1-201ENST00000609225 154 ntBASIC2.21□□□□□ -2.06
LDLRP01130 PCGEM1.1-201ENST00000613431 131 ntBASIC2.21□□□□□ -2.06
LDLRP01130 MIR376A1-201ENST00000616574 68 ntBASIC2.21□□□□□ -2.06
LDLRP01130 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LDLRP01130 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LDLRP01130 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LDLRP01130 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
LDLRP01130 RNU6-1159P-201ENST00000362933 107 ntBASIC2.2□□□□□ -2.06
LDLRP01130 Y_RNA.117-201ENST00000363294 101 ntBASIC2.2□□□□□ -2.06
LDLRP01130 RNU6-743P-201ENST00000364151 106 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms