Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLDN1O95832 AC091812.1-201ENST00000432235 1948 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 ZNF720P1-201ENST00000562403 1939 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 SNORA63C-201ENST00000364578 129 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 SNORA6-201ENST00000384033 151 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 RNU6-639P-201ENST00000384074 107 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 RNU6-793P-201ENST00000384233 104 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 Y_RNA.485-201ENST00000384395 102 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 Y_RNA.526-201ENST00000384572 110 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 BTF3P4-201ENST00000418852 495 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN1O95832 SDAD1P3-201ENST00000427380 333 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN1O95832 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN1O95832 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN1O95832 RNA5SP200-201ENST00000516360 103 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 RNU6-1012P-201ENST00000516606 109 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 RNU6-1137P-201ENST00000517073 99 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 AC034114.1-201ENST00000520293 285 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 AC022616.4-201ENST00000522985 181 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.88□□□□□ -2.11
CLDN1O95832 AC010999.1-201ENST00000611856 324 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 AC010205.1-201ENST00000616668 449 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
CLDN1O95832 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN1O95832 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CLDN1O95832 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CLDN1O95832 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 RNU4-52P-201ENST00000384209 138 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 RNU6-738P-201ENST00000384531 106 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 RNU6-823P-201ENST00000391042 103 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 MRPL35P1-201ENST00000404272 572 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN1O95832 AL445305.1-201ENST00000432577 575 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AC016925.1-201ENST00000458303 298 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AC010469.2-201ENST00000496412 480 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN1O95832 MIR449C-201ENST00000516047 92 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 Y_RNA.683-201ENST00000516508 93 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 Y_RNA.721-201ENST00000517207 102 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 CYCSP23-201ENST00000519781 313 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AC040926.1-201ENST00000530195 238 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.87□□□□□ -2.11
CLDN1O95832 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 AC006504.6-201ENST00000590142 199 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 SNORD11B-201ENST00000607707 90 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 MIR6132-201ENST00000622083 109 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 U6.92-201ENST00000636464 89 ntBASIC1.87□□□□□ -2.11
CLDN1O95832 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN1O95832 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN1O95832 RNY1P10-201ENST00000363268 113 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 SNORD31B-201ENST00000364977 69 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 Y_RNA.332-201ENST00000365271 113 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 Y_RNA.455-201ENST00000384230 98 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 RNU1-148P-201ENST00000384472 162 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 MIR606-201ENST00000384851 96 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 MIR586-201ENST00000385035 97 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 SNORD78.2-201ENST00000391076 69 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN1O95832 RNU6-985P-201ENST00000410182 104 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN1O95832 NDUFB4P10-201ENST00000452541 359 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN1O95832 RPL26P26-201ENST00000480251 434 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 RPS23P5-201ENST00000495419 428 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN1O95832 TRMT112P2-201ENST00000512910 132 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 RNU5F-4P-201ENST00000516581 114 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 RNU6-965P-201ENST00000516721 96 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN1O95832 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 MZT1P2-201ENST00000604387 248 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AL359821.1-201ENST00000605519 182 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AL357075.2-201ENST00000614906 189 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 AL162373.1-201ENST00000620433 407 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLDN1O95832 AC068205.3-201ENST00000636385 468 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLDN1O95832 MTND5P35-201ENST00000557537 1720 ntBASIC1.86□□□□□ -2.11
CLDN1O95832 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN1O95832 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 MIR410-201ENST00000362222 80 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 Y_RNA.179-201ENST00000363844 90 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNU6-879P-201ENST00000364328 108 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNU4-50P-201ENST00000364361 141 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 SNORA63.7-201ENST00000365579 123 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 SNORD14.1-201ENST00000365609 90 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 MIR300-201ENST00000401138 83 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 AL357139.1-201ENST00000407792 426 ntBASIC1.85□□□□□ -2.11
CLDN1O95832 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms