Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNORA8.3-201ENST00000384679 139 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 MIR569-201ENST00000385228 96 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 RNU6-735P-201ENST00000410612 107 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.98□□□□□ -1.93
CNOT4O95628 RNU2-44P-201ENST00000516795 194 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 AC107934.2-201ENST00000518653 310 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 MIR4431-201ENST00000579990 94 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 MIR7112-201ENST00000616126 65 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CNOT4O95628 AC134026.1-201ENST00000623249 2239 ntBASIC2.98□□□□□ -1.93
CNOT4O95628 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.98□□□□□ -1.93
CNOT4O95628 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CNOT4O95628 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CNOT4O95628 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CNOT4O95628 SNORA22C-201ENST00000384614 134 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 RNU6-1168P-201ENST00000390831 104 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 RNU6-578P-201ENST00000390980 103 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AL355497.1-201ENST00000406262 551 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 U6atac.2-201ENST00000408644 118 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
CNOT4O95628 RPS4XP2-201ENST00000458402 793 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 RNU7-26P-201ENST00000458980 63 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 RPL23AP94-201ENST00000512518 302 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 RNU7-121P-201ENST00000516604 62 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 MIR4276-201ENST00000584832 70 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AL513302.2-201ENST00000562313 1842 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AC068700.1-201ENST00000565862 3754 ntBASIC2.97□□□□□ -1.93
CNOT4O95628 AC069528.2-201ENST00000624849 1991 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.96□□□□□ -1.94
CNOT4O95628 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CNOT4O95628 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.96□□□□□ -1.94
CNOT4O95628 U3.8-201ENST00000363675 217 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU6-899P-201ENST00000363947 107 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU6-1048P-201ENST00000364054 107 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 snoU2_19.4-201ENST00000364329 80 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU4-10P-201ENST00000364383 140 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 Y_RNA.368-201ENST00000365547 113 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 SNORA67.2-201ENST00000384300 149 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU1-57P-201ENST00000384491 166 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 MIR626-201ENST00000385032 94 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU6-257P-201ENST00000410238 98 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 RNU6-855P-201ENST00000410395 104 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC126124.2-201ENST00000413542 321 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CNOT4O95628 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC080013.2-201ENST00000460866 323 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC021205.2-201ENST00000480069 347 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC010409.1-201ENST00000487382 476 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.96□□□□□ -1.94
CNOT4O95628 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.96□□□□□ -1.94
CNOT4O95628 AC107027.2-201ENST00000512197 115 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 MIR548X2-201ENST00000579776 100 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 MIR4325-201ENST00000583049 90 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 AC008873.1-201ENST00000625051 138 ntBASIC2.96□□□□□ -1.94
CNOT4O95628 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CNOT4O95628 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
CNOT4O95628 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.96□□□□□ -1.94
CNOT4O95628 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CNOT4O95628 AC100821.1-201ENST00000523153 2479 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 RNU6-220P-201ENST00000390919 107 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 AC009969.1-201ENST00000438726 172 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 EEF1B2P7-201ENST00000451177 676 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 AC010401.1-201ENST00000463867 348 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 CENPBD1P1-201ENST00000464061 469 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.95□□□□□ -1.94
CNOT4O95628 AC091826.1-201ENST00000514065 313 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 RNA5SP272-201ENST00000516095 111 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 HSPE1P18-201ENST00000517602 280 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 MIR5680-201ENST00000577577 84 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 AL365222.1-201ENST00000614661 98 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 Y_RNA.802-201ENST00000614892 130 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 U6.115-201ENST00000636045 103 ntBASIC2.95□□□□□ -1.94
CNOT4O95628 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.95□□□□□ -1.94
CNOT4O95628 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.95□□□□□ -1.94
CNOT4O95628 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CNOT4O95628 AC010332.2-201ENST00000613083 1904 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
CNOT4O95628 snoU2_19.1-201ENST00000362361 80 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 Y_RNA.81-201ENST00000362997 102 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 Y_RNA.341-201ENST00000365341 102 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 Y_RNA.361-201ENST00000365515 120 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 Y_RNA.456-201ENST00000384232 111 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.94□□□□□ -1.94
CNOT4O95628 UBE2DNL-203ENST00000474922 222 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 LARP7P3-201ENST00000579888 337 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 AL162274.2-201ENST00000614406 332 ntBASIC2.94□□□□□ -1.94
CNOT4O95628 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.94□□□□□ -1.94
CNOT4O95628 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
CNOT4O95628 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNOT4O95628 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.93□□□□□ -1.94
CNOT4O95628 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.93□□□□□ -1.94
CNOT4O95628 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNOT4O95628 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CNOT4O95628 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms