Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR5695-201ENST00000579717 85 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.48□□□□□ -2.49
USH2AO75445 AC005609.4-201ENST00000625071 447 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-78P-201ENST00000362897 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-505P-201ENST00000384427 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-393P-201ENST00000384475 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 USMG5P1-201ENST00000425964 177 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RPS23P5-201ENST00000495419 428 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIR3169-201ENST00000578032 83 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIR4677-201ENST00000584153 80 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AP003072.5-201ENST00000623872 773 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC104820.1-201ENST00000624183 307 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AP002371.2-201ENST00000624450 503 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
USH2AO75445 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.48□□□□□ -2.49
USH2AO75445 AL137246.1-201ENST00000607072 977 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RPS27AP14-201ENST00000422868 454 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MTCO3P29-201ENST00000432119 779 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC010587.1-201ENST00000505809 469 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RPL21P9-201ENST00000556149 474 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC018926.1-201ENST00000616335 435 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIR518B-201ENST00000385127 83 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 TAAR7P-201ENST00000436141 242 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 YWHAZP8-201ENST00000436935 731 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.49□□□□□ -2.49
USH2AO75445 RNU6-947P-201ENST00000516264 106 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC013828.2-201ENST00000532487 235 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AL359547.2-201ENST00000615810 418 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD24-201ENST00000383884 75 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AL589994.1-201ENST00000404962 340 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.49□□□□□ -2.49
USH2AO75445 TPT1P7-201ENST00000458300 517 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.49□□□□□ -2.49
USH2AO75445 RN7SKP256-201ENST00000517201 314 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 BCRP9-201ENST00000605312 388 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC012531.4-201ENST00000616509 177 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC090617.8-201ENST00000623339 167 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 FRG1KP-201ENST00000623592 341 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-12-201ENST00000362583 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-9-201ENST00000362912 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-19-201ENST00000363098 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-18-201ENST00000363293 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-17-201ENST00000364612 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD115-20-201ENST00000365099 82 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 MIR9-2-201ENST00000384838 87 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 MIR301A-201ENST00000385261 86 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AL355143.1-201ENST00000407101 841 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD100-201ENST00000408573 76 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORD18.2-201ENST00000459604 70 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC018714.1-201ENST00000605028 208 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AL109620.1-201ENST00000618738 1197 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC134878.1-201ENST00000619901 243 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC084368.1-201ENST00000620935 65 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC098679.4-201ENST00000624241 654 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
USH2AO75445 MIR1-1-201ENST00000362147 71 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 SNORA63.5-201ENST00000363548 123 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
USH2AO75445 AL163973.1-201ENST00000484753 577 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 MIR3925-201ENST00000584674 77 ntBASIC-0.49□□□□□ -2.49
USH2AO75445 AC024589.1-201ENST00000512207 263 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-369P-201ENST00000362515 102 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNY4P9-201ENST00000363194 97 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNA5SP56-201ENST00000410277 118 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-588P-201ENST00000410281 105 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.5□□□□□ -2.49
USH2AO75445 RNU7-134P-201ENST00000458997 64 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 SNORD22.1-201ENST00000516331 125 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-922P-201ENST00000516753 99 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-678P-201ENST00000516832 109 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-685P-201ENST00000517088 95 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 AC093012.1-202ENST00000549403 582 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.5□□□□□ -2.49
USH2AO75445 MIR4709-201ENST00000577272 72 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MIR3123-201ENST00000583417 75 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 AL161729.4-201ENST00000604650 476 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU5A-1-201ENST00000362698 116 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 MTATP6P30-201ENST00000443540 664 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 AC091163.3-201ENST00000518269 1144 ntBASIC-0.5□□□□□ -2.49
USH2AO75445 BNIP3P6-201ENST00000549284 499 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms